RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CD5P06127 495 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 SPART-AS1P0CW21 52 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 HLA-GP17693 338 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 ETV1P50549 477 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 TMEM50BP56557 158 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
ATXN3-224ENST00000554040 QRFPP83859 136 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 PLA2G7Q13093 441 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 FAM89BQ8N5H3 189 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 RHOXF1Q8NHV9 184 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 OR10C1Q96KK4 312 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 PGLYRP3Q96LB9 341 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 Q96MT0 163 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 DERL3Q96Q80 235 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 CMSS1Q9BQ75 279 aaKnown RBP4.83□□□□□ -1.64
ATXN3-224ENST00000554040 CABLES2Q9BTV7 478 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 KRTAP1-5Q9BYS1 174 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 MS4A6AQ9H2W1 248 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 HSF4Q9ULV5 492 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 POMPQ9Y244 141 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 PRELID3BQ9Y3B1 194 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 TMED3Q9Y3Q3 217 aa4.83□□□□□ -1.64
ATXN3-224ENST00000554040 FAT3Q8TDW7 4589 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 TRAV2A0A0B4J234 112 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 IGLC7A0M8Q6 106 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 FOXI3A8MTJ6 420 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 YIF1AO95070 293 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 CTSGP08311 255 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 CRHBPP24387 322 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 OR2B8PP59922 312 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 RPL30P62888 115 aaKnown RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 SSX1Q16384 188 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 C1orf100Q5SVJ3 147 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 SERTAD4-AS1Q5TG53 156 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 TTC23Q5W5X9 447 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 SLC25A24Q6NUK1 477 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 TCF24Q7RTU0 167 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 DUSP18Q8NEJ0 188 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 ZNRF2Q8NHG8 242 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF414Q96IQ9 312 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 ARHGAP5-AS1Q96IT6 56 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 SRSF8Q9BRL6 282 aaKnown RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 KCNK15Q9H427 330 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 FGF20Q9NP95 211 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 C21orf62Q9NYP8 219 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 MRPS7Q9Y2R9 242 aaKnown RBP4.82□□□□□ -1.64
ATXN3-224ENST00000554040 AP4S1Q9Y587 144 aa4.82□□□□□ -1.64
ATXN3-224ENST00000554040 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 IGHV3-21A0A0B4J1V1 117 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 NUPL2O15504 423 aaKnown RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 CYB5BO43169 146 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 CDK1P06493 297 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 BTF3P20290 206 aaKnown RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 DCKP27707 260 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 BRWD1-AS2P59051 145 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 RELQ04864 619 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 ZIK1Q3SY52 487 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 OR2B11Q5JQS5 317 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 UBE2UQ5VVX9 321 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 TMEM88Q6PEY1 159 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 KCTD9Q7L273 389 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 ZFP41Q8N8Y5 198 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 OR4S2Q8NH73 311 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 GINS4Q9BRT9 223 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 ATG101Q9BSB4 218 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 URM1Q9BTM9 101 aaKnown RBP4.81□□□□□ -1.64
ATXN3-224ENST00000554040 PECRQ9BY49 303 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 MDFICQ9P1T7 246 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 CLEC2DQ9UHP7 191 aa4.81□□□□□ -1.64
ATXN3-224ENST00000554040 TMEM189A5PLL7 270 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 SAC3D1A6NKF1 404 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 J3QRK9 145 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 HRASP01112 189 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 ALPLP05186 524 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 CD37P11049 281 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 FCGR1AP12314 374 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 EMP1P54849 157 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 TAS2R43P59537 309 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-224ENST00000554040 Q56UQ5 140 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 HSP90B2PQ58FF3 399 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 PLAC9Q5JTB6 97 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 ACTL10Q5JWF8 245 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 LRRTM1Q86UE6 522 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 H1FOOQ8IZA3 346 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-224ENST00000554040 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 C15orf53Q8NAA6 179 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 UBAC2Q8NBM4 344 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF485Q8NCK3 441 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 NIPSNAP3BQ9BS92 247 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 CENPOQ9BU64 300 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 VSIRQ9H7M9 311 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 BET1LQ9NYM9 111 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms