RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TECRQ9NZ01 308 aaKnown RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 KCNIP1Q9NZI2 227 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 PEMTQ9UBM1 199 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ERGIC3Q9Y282 383 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 LSM2Q9Y333 95 aaKnown RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 AK6Q9Y3D8 172 aaKnown RBP2.23□□□□□ -2.05
SLIRP-202ENST00000553981 ETV7Q9Y603 341 aa2.23□□□□□ -2.05
SLIRP-202ENST00000553981 IGKV3-7A0A075B6H7 116 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 KIR2DL5BA0A0G2JN68 375 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 KIR2DL5BA0A0G2JPC4 375 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 ZNF320A2RRD8 509 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 FAM223BA6NKX1 122 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 PMS2P5A8MQ11 134 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TRDCB7Z8K6 153 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 K7EIM0 57 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 MFNGO00587 321 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TSPAN4O14817 238 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 FABP7O15540 132 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 FCGR3BO75015 233 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 PRM2P04554 102 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 FCGR3AP08637 254 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 GNAO1P09471 354 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 GNB3P16520 340 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 SRMP19623 302 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CELP19835 753 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 NFYAP23511 347 aaPredicted RBP2.22□□□□□ -2.05
SLIRP-202ENST00000553981 ZBTB25P24278 435 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 HLA-DMBP28068 263 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 GPR183P32249 361 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CAPGP40121 348 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 LGALS7P47929 136 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TFPI2P48307 235 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 MNAT1P51948 309 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 OR10A3P58181 314 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 DEFB1P60022 68 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 PPP3R1P63098 170 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 GPR176Q14439 515 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CDK10Q15131 360 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 C2orf76Q3KRA6 126 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 ACSM3Q53FZ2 586 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 YIF1BQ5BJH7 314 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 ZC2HC1BQ5TFG8 222 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 LEMD1Q68G75 181 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 FAM223AQ8IWN6 122 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CDH26Q8IXH8 852 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 KIR2DL5AQ8N109 375 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 MAPKAPK5-AS1Q8N8E1 139 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 NECAP1Q8NC96 275 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 SLC24A4Q8NFF2 622 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 OR1L6Q8NGR2 347 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 OR11H2Q8NH07 326 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 KIR2DL5BQ8NHK3 375 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM167AQ8TBQ9 72 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CYGBQ8WWM9 190 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 ACOT12Q8WYK0 555 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM190Q8WZ59 177 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM68Q96MH6 324 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 S100A13Q99584 98 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 PHB2Q99623 299 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 RARRES2Q99969 163 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 PYGO2Q9BRQ0 406 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 TMEM59Q9BXS4 323 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 C11orf68Q9H3H3 251 aaKnown RBP2.22□□□□□ -2.05
SLIRP-202ENST00000553981 C5orf66Q9H5L9 145 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 SPACA1Q9HBV2 294 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 SLC2A9Q9NRM0 540 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 IMPAD1Q9NX62 359 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 CLEC5AQ9NY25 188 aa2.22□□□□□ -2.05
SLIRP-202ENST00000553981 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
SLIRP-202ENST00000553981 MRPL27Q9P0M9 148 aaKnown RBP2.22□□□□□ -2.05
SLIRP-202ENST00000553981 DIMT1Q9UNQ2 313 aaKnown RBP2.22□□□□□ -2.05
SLIRP-202ENST00000553981 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.05
SLIRP-202ENST00000553981 HMCN2Q8NDA2 5059 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 TRAV25A0A0B4J276 109 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 IGHV3-66A0A0C4DH42 116 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 OR2T8A6NH00 312 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 KNCNA6PVL3 124 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF705EA8MWA4 302 aaPredicted RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 EBAG9O00559 213 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CHEK1O14757 476 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 BET1O15155 118 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 TGOLN2O43493 480 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 SSX5O60225 188 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 KBTBD11O94819 623 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 IGHV3-48P01763 117 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 HLA-DQB1P01920 261 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 APOA2P02652 100 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CD74P04233 296 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CD2P06729 351 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 CTSGP08311 255 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 UCHL1P09936 223 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 DCKP27707 260 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 RPL27AP46776 148 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 XGP55808 180 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 OR2B8PP59922 312 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 RPS25P62851 125 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 WT1-ASQ06250 92 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 ST3GAL4Q11206 333 aa2.21□□□□□ -2.06
SLIRP-202ENST00000553981 MRPL28Q13084 256 aaKnown RBP2.21□□□□□ -2.06
SLIRP-202ENST00000553981 IRF3Q14653 427 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms