RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PPT1P50897 306 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 MLANAQ16655 118 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 HAGHQ16775 308 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 MRGPRG-AS1Q2M3A8 158 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 GCSAMLQ5JQS6 135 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 TNFRSF14Q92956 283 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 NPCDR1Q9BY65 106 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 PLEKHA3Q9HB20 300 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 INSIG2Q9Y5U4 225 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 POLQO75417 2590 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 hCG_1809904A0A1W2PP81 198 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 A0A1W2PPE2 198 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 A0A1W2PR64 198 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 RD3LP0DJH9 198 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 NPY1RP25929 384 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 FAM71F2Q6NXP2 309 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 C1orf159Q96HA4 380 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 RCC1LQ96I51 464 aaKnown RBP10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 ENY2Q9NPA8 101 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 ABCA1O95477 2261 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 FBP1P09467 338 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 IL3RAP26951 378 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 CD1BP29016 333 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 RPL8P62917 257 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 ARSJQ5FYB0 599 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 RPEQ96AT9 228 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 REG1AP05451 166 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 DVL1P1P54792 670 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 VMO1Q7Z5L0 202 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 RPP25LQ8N5L8 163 aaKnown RBP10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 BEND2Q8NDZ0 799 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 CLDND2Q8NHS1 167 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 SLC25A22Q9H936 323 aa10.26□□□□□ -0.77
VIPAS39-206ENST00000553888 BTBD17A6NE02 478 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 LY6LH3BQJ8 138 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 C9orf152Q5JTZ5 239 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 FFAR4Q5NUL3 377 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 SP5Q6BEB4 398 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 TREML4Q6UXN2 200 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 SLC16A13Q7RTY0 426 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 A0A1W2PPI3 338 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 MDKP21741 143 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 PCGF1Q9BSM1 259 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 COMMD5Q9GZQ3 224 aa10.25□□□□□ -0.77
VIPAS39-206ENST00000553888 A0A1W2PRV1 198 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 TIMM23O14925 209 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 RBP4P02753 201 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 RAB13P51153 203 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 DYNAPQ8N1N2 210 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 TMEM167AQ8TBQ9 72 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 CCL19Q99731 98 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 NIT2Q9NQR4 276 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 NDUFA4L2Q9NRX3 87 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 ZNF257Q9Y2Q1 563 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 NBPF19A0A087WUL8 3843 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 OR13C7P0DN81 318 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 LGALS4P56470 323 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 LMO4P61968 165 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 DEFA6Q01524 100 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 WT1-ASQ06250 92 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 TMEM41BQ5BJD5 291 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 SSMEM1Q8WWF3 244 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 MGST2Q99735 147 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
VIPAS39-206ENST00000553888 USF1P22415 310 aaPredicted RBP10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 S100A7P31151 101 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 MC5RP33032 325 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 NPBWR1P48145 328 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 RAB11AP62491 216 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 GNB1P62873 340 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 TLE4Q04727 773 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 TMPRSS5Q9H3S3 457 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 FAM74A7A6NL05 159 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 RNASE2P10153 161 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 CEBPGP53567 150 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 SERF2P84101 59 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 MIC13Q5XKP0 118 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 OR5B3Q8NH48 314 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 FBXL15Q9H469 300 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 GNG13Q9P2W3 67 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 FCN1O00602 326 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 PRTN3P24158 256 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 HTR1DP28221 377 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 PAX2Q02962 417 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 C10orf91Q5T1B1 145 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 OR1L8Q8NGR8 309 aa10.23□□□□□ -0.77
VIPAS39-206ENST00000553888 CHD6Q8TD26 2715 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 RBFOX3A6NFN3 312 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 ZFP92A6NM28 416 aa10.22□□□□□ -0.77
VIPAS39-206ENST00000553888 M0R1W7 72 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms