RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PLGRKTQ9HBL7 147 aa6.42□□□□□ -1.38
PRKCH-208ENST00000553846 TMEM140Q9NV12 185 aa6.42□□□□□ -1.38
PRKCH-208ENST00000553846 SMPD3Q9NY59 655 aaPredicted RBP6.42□□□□□ -1.38
PRKCH-208ENST00000553846 AK6Q9Y3D8 172 aaKnown RBP6.42□□□□□ -1.38
PRKCH-208ENST00000553846 TRAV14DV4A0A0A6YYC5 116 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 TEX50A0A1B0GTY4 177 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 KNCNA6PVL3 124 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ZNF705FA8MVS1 300 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 J3QL48 77 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 MYL12BO14950 172 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ATP5HO75947 161 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 IFNA21P01568 189 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 IFNA17P01571 189 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ZNF705DP0CH99 300 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ZNF705BP0CI00 300 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 RELQ04864 619 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ZNF705AQ6ZN79 300 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 AHSA2Q719I0 299 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 HSD17B13Q7Z5P4 300 aaPredicted RBP6.41□□□□□ -1.38
PRKCH-208ENST00000553846 UBE2DNLQ8IWF7 75 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 ZNRF2Q8NHG8 242 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 CENPOQ9BU64 300 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 PLCXD1Q9NUJ7 323 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 RAB22AQ9UL26 194 aa6.41□□□□□ -1.38
PRKCH-208ENST00000553846 NBDYA0A0U1RRE5 68 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 EPM2AB3EWF7 344 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 TRAPPC2P0DI81 140 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 TRAPPC2BP0DI82 140 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 INAFM2P0DMQ5 153 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 FAM3BP58499 235 aaPredicted RBP6.4□□□□□ -1.38
PRKCH-208ENST00000553846 PAFAH1B2P68402 229 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 MRPS15P82914 257 aaKnown RBP6.4□□□□□ -1.38
PRKCH-208ENST00000553846 Q56UQ5 140 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 UBE2UQ5VVX9 321 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 SLC25A24Q6NUK1 477 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 TOMM20LQ6UXN7 152 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 SPAG16Q8N0X2 631 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 CADM3Q8N126 398 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 PQLC1Q8N2U9 271 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 C6orf223Q8N319 242 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 LSM10Q969L4 123 aaKnown RBP6.4□□□□□ -1.38
PRKCH-208ENST00000553846 CMTM3Q96MX0 182 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 NEU1Q99519 415 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 HRASLSQ9HDD0 168 aa6.4□□□□□ -1.38
PRKCH-208ENST00000553846 DBX1A6NMT0 343 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 TNFSF12O43508 249 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 SSX5O60225 188 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 GNAO1P09471 354 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 CTXN2P0C2S0 81 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 NQO2P16083 231 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 RAB6AP20340 208 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 RPS25P62851 125 aaKnown RBP6.39□□□□□ -1.39
PRKCH-208ENST00000553846 CNIH2Q6PI25 160 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF555Q8NEP9 628 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 OR1L8Q8NGR8 309 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 OR1P1Q8NH06 330 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 CYGBQ8WWM9 190 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 TXN2Q99757 166 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 KRTAP1-5Q9BYS1 174 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 PLEKHA2Q9HB19 425 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 CCL28Q9NRJ3 127 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 COMMD9Q9P000 198 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 DKK2Q9UBU2 259 aa6.39□□□□□ -1.39
PRKCH-208ENST00000553846 A0A075B6Q4 140 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 IGHV3-66A0A0C4DH42 116 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 A0A1B0GU03 582 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 SULT1C2O00338 296 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 CYB5BO43169 146 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 ST8SIA3O43173 380 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 YIF1AO95070 293 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 HPRT1P00492 218 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF688P0C7X2 276 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 GADD45AP24522 165 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 NPY1RP25929 384 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 OR10A3P58181 314 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 OXA1LQ15070 435 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 SPHARQ15513 63 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 ACTL10Q5JWF8 245 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 HES5Q5TA89 166 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 HACD4Q5VWC8 232 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 TMEM88Q6PEY1 159 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 ZNF114Q8NC26 417 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 DUSP18Q8NEJ0 188 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 TMEM203Q969S6 136 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 AIFM2Q9BRQ8 373 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 MND1Q9BWT6 205 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 YTHDF1Q9BYJ9 559 aaKnown RBP6.38□□□□□ -1.39
PRKCH-208ENST00000553846 V9GY05 133 aa6.38□□□□□ -1.39
PRKCH-208ENST00000553846 MARCH11A6NNE9 402 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 DNASE2O00115 360 aaPredicted RBP6.37□□□□□ -1.39
PRKCH-208ENST00000553846 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 SPART-AS1P0CW21 52 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 XGP55808 180 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 FABP5Q01469 135 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 CENPSQ8N2Z9 138 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 ZBTB34Q8NCN2 500 aa6.37□□□□□ -1.39
PRKCH-208ENST00000553846 OR13F1Q8NGS4 319 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms