RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 THTPAQ9BU02 230 aa2.57□□□□□ -2
TDP1-207ENST00000553617 C1QTNF6Q9BXI9 259 aa2.57□□□□□ -2
TDP1-207ENST00000553617 MED9Q9NWA0 146 aa2.57□□□□□ -2
TDP1-207ENST00000553617 PCTPQ9UKL6 214 aa2.57□□□□□ -2
TDP1-207ENST00000553617 SMAD5-AS1Q9Y6J3 95 aa2.57□□□□□ -2
TDP1-207ENST00000553617 NACAE9PAV3 2078 aa2.57□□□□□ -2
TDP1-207ENST00000553617 DOCK8Q8NF50 2099 aa2.57□□□□□ -2
TDP1-207ENST00000553617 NAIPQ13075 1403 aa2.57□□□□□ -2
TDP1-207ENST00000553617 MYOM3Q5VTT5 1437 aa2.57□□□□□ -2
TDP1-207ENST00000553617 PRG4Q92954 1404 aaPredicted RBP2.57□□□□□ -2
TDP1-207ENST00000553617 BCL9LQ86UU0 1499 aa2.57□□□□□ -2
TDP1-207ENST00000553617 MBD5Q9P267 1494 aa2.57□□□□□ -2
TDP1-207ENST00000553617 MAP3K1Q13233 1512 aa2.57□□□□□ -2
TDP1-207ENST00000553617 KIAA1551Q9HCM1 1747 aa2.56□□□□□ -2
TDP1-207ENST00000553617 TRIP11Q15643 1979 aa2.56□□□□□ -2
TDP1-207ENST00000553617 ANKRD12Q6UB98 2062 aa2.56□□□□□ -2
TDP1-207ENST00000553617 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
TDP1-207ENST00000553617 IGHV1-69-2A0A0G2JMI3 117 aa2.56□□□□□ -2
TDP1-207ENST00000553617 C4orf51C9J302 202 aa2.56□□□□□ -2
TDP1-207ENST00000553617 ZNF670-ZNF695F2Z2N8 137 aa2.56□□□□□ -2
TDP1-207ENST00000553617 INS-IGF2F8WCM5 200 aa2.56□□□□□ -2
TDP1-207ENST00000553617 J3QRK9 145 aa2.56□□□□□ -2
TDP1-207ENST00000553617 PGLYRP1O75594 196 aaPredicted RBP2.56□□□□□ -2
TDP1-207ENST00000553617 ZNF728P0DKX0 622 aa2.56□□□□□ -2
TDP1-207ENST00000553617 SMIM10L2AP0DMW4 78 aa2.56□□□□□ -2
TDP1-207ENST00000553617 SMIM10L2BP0DMW5 78 aa2.56□□□□□ -2
TDP1-207ENST00000553617 HLA-EP13747 358 aa2.56□□□□□ -2
TDP1-207ENST00000553617 FKBP2P26885 142 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 OR10J1P30954 320 aa2.56□□□□□ -2
TDP1-207ENST00000553617 RPS10P46783 165 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 PSMB3P49720 205 aa2.56□□□□□ -2
TDP1-207ENST00000553617 SYNJ2BPP57105 145 aa2.56□□□□□ -2
TDP1-207ENST00000553617 EIF3IQ13347 325 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 VMA21Q3ZAQ7 101 aa2.56□□□□□ -2
TDP1-207ENST00000553617 FBXL19-AS1Q494R0 122 aa2.56□□□□□ -2
TDP1-207ENST00000553617 MEIG1Q5JSS6 88 aa2.56□□□□□ -2
TDP1-207ENST00000553617 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
TDP1-207ENST00000553617 UNQ9165/PRO28630Q6UXU0 137 aa2.56□□□□□ -2
TDP1-207ENST00000553617 LHFPL1Q86WI0 220 aa2.56□□□□□ -2
TDP1-207ENST00000553617 MMGT1Q8N4V1 131 aa2.56□□□□□ -2
TDP1-207ENST00000553617 C5orf17Q8NAS9 161 aa2.56□□□□□ -2
TDP1-207ENST00000553617 OR4S1Q8NGB4 309 aa2.56□□□□□ -2
TDP1-207ENST00000553617 OR10D4PQ8NGN7 298 aa2.56□□□□□ -2
TDP1-207ENST00000553617 GINS4Q9BRT9 223 aa2.56□□□□□ -2
TDP1-207ENST00000553617 DERL1Q9BUN8 251 aa2.56□□□□□ -2
TDP1-207ENST00000553617 GGTLC1Q9BX51 225 aa2.56□□□□□ -2
TDP1-207ENST00000553617 IMUPQ9GZP8 106 aa2.56□□□□□ -2
TDP1-207ENST00000553617 AICDAQ9GZX7 198 aa2.56□□□□□ -2
TDP1-207ENST00000553617 MED28Q9H204 178 aa2.56□□□□□ -2
TDP1-207ENST00000553617 TMEM133Q9H2Q1 129 aa2.56□□□□□ -2
TDP1-207ENST00000553617 TCEAL2Q9H3H9 227 aaPredicted RBP2.56□□□□□ -2
TDP1-207ENST00000553617 RERGLQ9H628 205 aa2.56□□□□□ -2
TDP1-207ENST00000553617 RPP21Q9H633 154 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 FBXL12Q9NXK8 326 aa2.56□□□□□ -2
TDP1-207ENST00000553617 COQ4Q9Y3A0 265 aa2.56□□□□□ -2
TDP1-207ENST00000553617 PTPRTO14522 1441 aa2.56□□□□□ -2
TDP1-207ENST00000553617 CLIP1P30622 1438 aa2.56□□□□□ -2
TDP1-207ENST00000553617 ARHGAP31Q2M1Z3 1444 aa2.56□□□□□ -2
TDP1-207ENST00000553617 RRBP1Q9P2E9 1410 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 TCOF1Q13428 1488 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 ZFYVE16Q7Z3T8 1539 aa2.56□□□□□ -2
TDP1-207ENST00000553617 DICER1Q9UPY3 1922 aaKnown RBP2.56□□□□□ -2
TDP1-207ENST00000553617 IGKV1-8A0A0C4DH67 115 aa2.55□□□□□ -2
TDP1-207ENST00000553617 A0A0G2JMM0 328 aa2.55□□□□□ -2
TDP1-207ENST00000553617 A0A1W2PPB8 328 aa2.55□□□□□ -2
TDP1-207ENST00000553617 IZUMO1RA6ND01 250 aa2.55□□□□□ -2
TDP1-207ENST00000553617 MEIS3P1A6NDR6 274 aa2.55□□□□□ -2
TDP1-207ENST00000553617 KIR3DP1A8MWS1 328 aa2.55□□□□□ -2
TDP1-207ENST00000553617 M0R381 172 aa2.55□□□□□ -2
TDP1-207ENST00000553617 CHD1O14646 1710 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ARHGEF11O15085 1522 aa2.55□□□□□ -2
TDP1-207ENST00000553617 LYZL6O75951 148 aa2.55□□□□□ -2
TDP1-207ENST00000553617 GABARAPO95166 117 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ADGRL2O95490 1459 aa2.55□□□□□ -2
TDP1-207ENST00000553617 NCR2O95944 276 aa2.55□□□□□ -2
TDP1-207ENST00000553617 HLA-DPB1P04440 258 aa2.55□□□□□ -2
TDP1-207ENST00000553617 P0DMU3 169 aa2.55□□□□□ -2
TDP1-207ENST00000553617 FAM231AP0DMU4 169 aa2.55□□□□□ -2
TDP1-207ENST00000553617 FAM231CP0DMU5 169 aa2.55□□□□□ -2
TDP1-207ENST00000553617 CTSEP14091 401 aa2.55□□□□□ -2
TDP1-207ENST00000553617 HIST1H1DP16402 221 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 PZPP20742 1482 aa2.55□□□□□ -2
TDP1-207ENST00000553617 KDM5AP29375 1690 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 OPRK1P41145 380 aa2.55□□□□□ -2
TDP1-207ENST00000553617 INPP1P49441 399 aa2.55□□□□□ -2
TDP1-207ENST00000553617 UBE2AP49459 152 aa2.55□□□□□ -2
TDP1-207ENST00000553617 TPPP2P59282 170 aa2.55□□□□□ -2
TDP1-207ENST00000553617 RPS11P62280 158 aaKnown RBP eCLIP2.55□□□□□ -2
TDP1-207ENST00000553617 MYL5Q02045 173 aa2.55□□□□□ -2
TDP1-207ENST00000553617 GRIN2AQ12879 1464 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ZNF141Q15928 474 aa2.55□□□□□ -2
TDP1-207ENST00000553617 MIA3Q5JRA6 1907 aa2.55□□□□□ -2
TDP1-207ENST00000553617 CLLU1OSQ5K130 101 aa2.55□□□□□ -2
TDP1-207ENST00000553617 CLLU1Q5K131 121 aa2.55□□□□□ -2
TDP1-207ENST00000553617 SPANXN3Q5MJ09 141 aa2.55□□□□□ -2
TDP1-207ENST00000553617 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
TDP1-207ENST00000553617 TMEM14EPQ6UXP3 125 aa2.55□□□□□ -2
TDP1-207ENST00000553617 CCDC141Q6ZP82 1450 aa2.55□□□□□ -2
TDP1-207ENST00000553617 SHISA6Q6ZSJ9 500 aa2.55□□□□□ -2
TDP1-207ENST00000553617 SLC35E3Q7Z769 313 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms