RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 TSC22D3Q99576 134 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 COMMD5Q9GZQ3 224 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 COPZ2Q9P299 210 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 C14orf166Q9Y224 244 aaKnown RBP8.89□□□□□ -0.99
SRP54-203ENST00000553544 HERC2O95714 4834 aa8.89□□□□□ -0.99
SRP54-203ENST00000553544 TEX50A0A1B0GTY4 177 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 CXorf65A6NEN9 183 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 PPP5D1E7EU14 171 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 M0QYG6 137 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 REG1AP05451 166 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 ETV6P41212 452 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 RND3P61587 244 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 PHLDA2Q53GA4 152 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 LHFPL1Q86WI0 220 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 GPHB5Q86YW7 130 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 TOMM5Q8N4H5 51 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 OR10W1Q8NGF6 305 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 QTRT1Q9BXR0 403 aaKnown RBP8.88□□□□□ -0.99
SRP54-203ENST00000553544 NDUFA4L2Q9NRX3 87 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 PEMTQ9UBM1 199 aa8.88□□□□□ -0.99
SRP54-203ENST00000553544 ANKRD20A5PA0PJZ0 165 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 OR11H12B2RN74 326 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 LGALS9O00182 355 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 CYB5BO43169 146 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 GGCTO75223 188 aaKnown RBP8.87□□□□□ -0.99
SRP54-203ENST00000553544 OR2C1O95371 312 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 KRASP01116 189 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 HLA-AP01891 365 aaKnown RBP8.87□□□□□ -0.99
SRP54-203ENST00000553544 SERPINE2P07093 398 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 TRAPPC2P0DI81 140 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 TRAPPC2BP0DI82 140 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 DEFA4P12838 97 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 G6PCP35575 357 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 PPP5CP53041 499 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 WT1-ASQ06250 92 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 TRIQKQ629K1 86 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 LINC00299Q6ZSB3 139 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 HSD17B13Q7Z5P4 300 aaPredicted RBP8.87□□□□□ -0.99
SRP54-203ENST00000553544 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 CCDC190Q86UF4 302 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 GDPD1Q8N9F7 314 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 OR1L8Q8NGR8 309 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 EEF1AKMT3Q96AZ1 226 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 CXorf58Q96LI9 332 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 SOSTQ9BQB4 213 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 MCUBQ9NWR8 336 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 FKBP11Q9NYL4 201 aa8.87□□□□□ -0.99
SRP54-203ENST00000553544 TRBV7-1A0A0A6YYK4 115 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 NUPR2A6NF83 97 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 MFSD2BA6NFX1 497 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 SNAPC5O75971 98 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 IGKV1-39P01597 117 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 IGHV3-23P01764 117 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 IGKV1D-39P04432 117 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 CTSDP07339 412 aaPredicted RBP8.86□□□□□ -0.99
SRP54-203ENST00000553544 CD7P09564 240 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 ARL3P36405 182 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 PIGPP57054 158 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 CD300EQ496F6 205 aaPredicted RBP8.86□□□□□ -0.99
SRP54-203ENST00000553544 CLEC19AQ6UXS0 136 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 OR4C16Q8NGL9 310 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 ZNF502Q8TBZ5 544 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 SEC22AQ96IW7 307 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 NSG2Q9Y328 171 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 S4R3C0 116 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 V9GYH0 126 aa8.86□□□□□ -0.99
SRP54-203ENST00000553544 PCLOQ9Y6V0 5065 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 C2orf70A6NJV1 201 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 DBX1A6NMT0 343 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 CENPXA8MT69 81 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 CLEC3BP05452 202 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 OR13C7P0DN81 318 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 FOLR2P14207 255 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 EDN2P20800 178 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 MFAP2P55001 183 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 PMS2P11Q13670 270 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 DEFB114Q30KQ6 69 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 CEMP1Q6PRD7 247 aaPredicted RBP8.85□□□□□ -0.99
SRP54-203ENST00000553544 RPP25LQ8N5L8 163 aaKnown RBP8.85□□□□□ -0.99
SRP54-203ENST00000553544 OR5B3Q8NH48 314 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 VN1R17PQ8TDU5 208 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 TMEM14BQ9NUH8 114 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 THYN1Q9P016 225 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 CACFD1Q9UGQ2 172 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 KLK5Q9Y337 293 aaPredicted RBP8.85□□□□□ -0.99
SRP54-203ENST00000553544 OR51B2Q9Y5P1 312 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
SRP54-203ENST00000553544 NAP1L6A6NFF2 107 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 C15orf61A6NNL5 157 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 A8MWP6 167 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 ANXA3P12429 323 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 CBLN1P23435 193 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 AKR1C2P52895 323 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 GUCA2BQ16661 112 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 ZNF57Q68EA5 555 aaPredicted RBP8.84□□□□□ -0.99
SRP54-203ENST00000553544 H2BFWTQ7Z2G1 175 aa8.84□□□□□ -0.99
SRP54-203ENST00000553544 OR4D10Q8NGI6 311 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms