RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 GCHFRP30047 84 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 GLRXP35754 106 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 CHRNA7P36544 502 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 CCL11P51671 97 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 PAFAH1B2P68402 229 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 EDDM3AQ14507 147 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 RTL8BQ17RB0 113 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 COX19Q49B96 90 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 FAM78BQ5VT40 261 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 SSX9Q7RTT3 188 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 GCNT2Q8N0V5 402 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 PNKDQ8N490 385 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 OR2Z1Q8NG97 314 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 LINC00476Q8WZB0 136 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 C11orf52Q96A22 123 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 SFRP2Q96HF1 295 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 MGST2Q99735 147 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 C2orf88Q9BSF0 95 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 LINC00574Q9H8X3 128 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 FKBP11Q9NYL4 201 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 ELOVL5Q9NYP7 299 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 CALYQ9NYX4 217 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 PRNDQ9UKY0 176 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 FUT9Q9Y231 359 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 TCF19Q9Y242 345 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF257Q9Y2Q1 563 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 LSM4Q9Y4Z0 139 aaKnown RBP4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC25A15Q9Y619 301 aa4.9□□□□□ -1.63
CHMP4A-210ENST00000552620 MED13Q9UHV7 2174 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 CHD3Q12873 2000 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TRBV9A0A0B4J1U6 114 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TRAV38-1A0A0B4J264 116 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 C15orf61A6NNL5 157 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 A8MWP6 167 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC31A2O15432 143 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TNFSF13O75888 250 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 CRYAAP02489 173 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 RD3LP0DJH9 198 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ARL14EPLP0DKL9 152 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ESDP10768 282 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 IGFBP2P18065 325 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 NPY1RP25929 384 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TIMP3P35625 211 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ATP5G3P48201 142 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 KLF3P57682 345 aaPredicted RBP4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SELENOVP59797 346 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 UBE2G2P60604 165 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SELENOTP62341 195 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 MRPS11P82912 194 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SPINK9Q5DT21 86 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TIMM23BQ5SRD1 257 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ATP1A1-AS1Q5TC04 95 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 MIC13Q5XKP0 118 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 Q6YL49 198 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ABHD12Q8N2K0 398 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF664Q8N3J9 261 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TPRX1Q8N7U7 411 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC24A4Q8NFF2 622 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 FDCSPQ8NFU4 85 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SGMS2Q8NHU3 365 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 OCC1Q8TAD7 63 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 FAM222BQ8WU58 562 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 NEUROG1Q92886 237 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 STARD4Q96DR4 205 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 DAZAP1Q96EP5 407 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SDSLQ96GA7 329 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC35E1Q96K37 410 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 DCTN5Q9BTE1 182 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 NDUFAF3Q9BU61 184 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 FAM234AQ9H0X4 552 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 IFI27L2Q9H2X8 130 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 PRO1933Q9H354 126 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 PATZ1Q9HBE1 687 aaKnown RBP4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TMEM167BQ9NRX6 74 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 TMEM14BQ9NUH8 114 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 IL36BQ9NZH7 164 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 FZR1Q9UM11 496 aa4.89□□□□□ -1.63
CHMP4A-210ENST00000552620 DOCK7Q96N67 2140 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 CACNA1DQ01668 2161 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 KNTC1P50748 2209 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TRAV3A0A0B4J244 114 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 SH2D7A6NKC9 451 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF705GA8MUZ8 300 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 UPK2O00526 184 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR10J4P0C629 311 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR10J1P30954 320 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 LINC00205P59089 165 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TAS2R45P59539 299 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TAS2R60P59551 318 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 ERVFC1-1P60608 527 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 RAB4BP61018 213 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF90Q03938 601 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 Q0VG73 95 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 EFNB3Q15768 340 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 LTC4SQ16873 150 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 CLEC12BQ2HXU8 276 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 C17orf58Q2M2W7 97 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 RPL39P5Q59GN2 51 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms