RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 SLC35E3Q7Z769 313 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 STPG2Q8N412 459 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 KCNRGQ8N5I3 272 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 TTC9CQ8N5M4 171 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 OR10P1Q8NGE3 313 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 RNASEH2CQ8TDP1 164 aaKnown RBP8.23□□□□□ -1.09
NEK3-203ENST00000551355 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
NEK3-203ENST00000551355 TEX15Q9BXT5 2789 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 ZANQ9Y493 2812 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 A0A1B0GW64 132 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 KANTRA0A1W2PQU2 76 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 RNF222A6NCQ9 220 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 FAM24AA6NFZ4 105 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 DNAJC9-AS1A6NH13 148 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 INAFM1C9JVW0 142 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 E7EUB6 86 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 AP4M1O00189 453 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 DFFBO76075 338 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 IFNA4P05014 189 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 CRYGCP07315 174 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
NEK3-203ENST00000551355 DEFA4P12838 97 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 HIST1H1BP16401 226 aaKnown RBP8.22□□□□□ -1.09
NEK3-203ENST00000551355 EWSR1Q01844 656 aaKnown RBP eCLIP8.22□□□□□ -1.09
NEK3-203ENST00000551355 WT1-ASQ06250 92 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 ETFRF1Q6IPR1 90 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 C9orf62Q8N4C0 152 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 HSPB9Q9BQS6 159 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 GSX1Q9H4S2 264 aaPredicted RBP8.22□□□□□ -1.09
NEK3-203ENST00000551355 PARP11Q9NR21 331 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 THYN1Q9P016 225 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 HSPB11Q9Y547 144 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 F11RQ9Y624 299 aaKnown RBP8.22□□□□□ -1.09
NEK3-203ENST00000551355 NAV3Q8IVL0 2385 aa8.22□□□□□ -1.09
NEK3-203ENST00000551355 RPS10-NUDT3A0A1W2PQS6 291 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 IGSF23A1L1A6 192 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 C15orf62A8K5M9 175 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 FNDC10F2Z333 226 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 H3BP45 60 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 ATP6V0E1O15342 81 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 BRI3O95415 125 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 CRYBA1P05813 215 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 RNASE2P10153 161 aaKnown RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 EGR2P11161 476 aaPredicted RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 CTRB1P17538 263 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 CXCL2P19875 107 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 GPX4P36969 197 aaPredicted RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 BLCAPP62952 87 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 EIF5AP63241 154 aaKnown RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 EXOSC2Q13868 293 aaKnown RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 ZNF266Q14584 549 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 LGALSLQ3ZCW2 172 aaPredicted RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 C9orf152Q5JTZ5 239 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 CTRB2Q6GPI1 263 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 ETV3LQ6ZN32 361 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 TMUB2Q71RG4 321 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 Q8N2B8 174 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 LFNGQ8NES3 379 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 CACNG8Q8WXS5 425 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 OR4C12Q96R67 309 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 P2RX4Q99571 388 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 ARPC5LQ9BPX5 153 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 ARL6Q9H0F7 186 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 TNFRSF19Q9NS68 423 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 PAIP2BQ9ULR5 123 aaKnown RBP8.21□□□□□ -1.1
NEK3-203ENST00000551355 HIVEP2P31629 2446 aa8.21□□□□□ -1.1
NEK3-203ENST00000551355 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 TRAV41A0A0B4J266 112 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 H3BUA1 57 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 BCL2L11O43521 198 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 TCF21O43680 179 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 FBXO24O75426 580 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 JTBO76095 146 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 CST7O76096 145 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 AREGP15514 252 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
NEK3-203ENST00000551355 NDPQ00604 133 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 NHLH2Q02577 135 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 KLK9Q2XQG4 91 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
NEK3-203ENST00000551355 UNQ5815/PRO19632Q6UWF5 114 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 LILRB2Q8N423 598 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 FAM110DQ8TAY7 271 aaPredicted RBP8.2□□□□□ -1.1
NEK3-203ENST00000551355 FAM103A1Q9BTL3 118 aaKnown RBP8.2□□□□□ -1.1
NEK3-203ENST00000551355 WNT10AQ9GZT5 417 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 KLK9Q9UKQ9 250 aa8.2□□□□□ -1.1
NEK3-203ENST00000551355 TMEM89A2RUT3 159 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 PMS2P5A8MQ11 134 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 UBA52P62987 128 aaKnown RBP8.19□□□□□ -1.1
NEK3-203ENST00000551355 DLK1P80370 383 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 SLC38A11Q08AI6 406 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 LAMTOR1Q6IAA8 161 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
NEK3-203ENST00000551355 Q71RC1 249 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms