RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 RPL35AP18077 110 aaKnown RBP16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 DGCR14Q96DF8 476 aaKnown RBP16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 GALNT14Q96FL9 552 aa16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 ZNF2Q9BSG1 426 aaPredicted RBP16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 SMPXQ9UHP9 88 aa16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 KLK5Q9Y337 293 aaPredicted RBP16.02■□□□□ 0.16
SMARCC2-210ENST00000550519 G6PCP35575 357 aa16.01■□□□□ 0.15
SMARCC2-210ENST00000550519 UBAC2Q8NBM4 344 aa16.01■□□□□ 0.15
SMARCC2-210ENST00000550519 SNAPC5O75971 98 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 NAT1P18440 290 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 Q56UQ5 140 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 CMTM1Q8IZ96 169 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 TMEM217Q8N7C4 229 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 OR5B3Q8NH48 314 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 S100A16Q96FQ6 103 aaKnown RBP16■□□□□ 0.15
SMARCC2-210ENST00000550519 TMEM56Q96MV1 263 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 Q9H521 79 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 FKBP11Q9NYL4 201 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 PRNDQ9UKY0 176 aa16■□□□□ 0.15
SMARCC2-210ENST00000550519 PMP2P02689 132 aa15.99■□□□□ 0.15
SMARCC2-210ENST00000550519 OR1P1Q8NH06 330 aa15.99■□□□□ 0.15
SMARCC2-210ENST00000550519 RNF2Q99496 336 aa15.99■□□□□ 0.15
SMARCC2-210ENST00000550519 TMEM14BQ9NUH8 114 aa15.99■□□□□ 0.15
SMARCC2-210ENST00000550519 KMT2AQ03164 3969 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 FRAS1Q86XX4 4008 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 DBX1A6NMT0 343 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 GPR31O00270 319 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 CHEK1O14757 476 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 FCGR2BP31994 310 aaPredicted RBP15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 APRG1Q8IVJ8 170 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 TSPAN14Q8NG11 270 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 OR10C1Q96KK4 312 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 RHPN1-AS1Q9BWJ2 59 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 FXYD6Q9H0Q3 95 aa15.98■□□□□ 0.15
SMARCC2-210ENST00000550519 IGHV7-4-1A0A0J9YVY3 117 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 C15orf61A6NNL5 157 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 TAS2R46P59540 309 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 RELQ04864 619 aaPredicted RBP15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 NEDD8Q15843 81 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 UBE2NLQ5JXB2 153 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 CROCCP3Q8IVE0 287 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 OR5H2Q8NGV7 314 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 PHLDA1Q8WV24 401 aaPredicted RBP15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 TSC22D3Q99576 134 aa15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 C6orf62Q9GZU0 229 aaPredicted RBP15.97■□□□□ 0.15
SMARCC2-210ENST00000550519 I3L2K1 104 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 NUPL2O15504 423 aaKnown RBP15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 ATP6V1G2O95670 118 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 CMC4P56277 68 aaPredicted RBP15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 TAS2R20P59543 309 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 ZNF124Q15973 351 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 RPP25LQ8N5L8 163 aaKnown RBP15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 TMEM116Q8NCL8 245 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 OR6F1Q8NGZ6 308 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 CSTL1Q9H114 145 aa15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 FAM212BQ9NTI7 297 aaPredicted RBP15.96■□□□□ 0.15
SMARCC2-210ENST00000550519 TGFBR1P36897 503 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 MFAP4P55083 255 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 TMEM69Q5SWH9 247 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 FAM90A2PQ658T7 463 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 LYSMD2Q8IV50 215 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 SLC25A46Q96AG3 418 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 TXN2Q99757 166 aa15.95■□□□□ 0.14
SMARCC2-210ENST00000550519 MPTX1A8MV57 137 aa15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 LGALS9CQ6DKI2 356 aa15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 GATAD1Q8WUU5 269 aa15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 MISP3Q96FF7 219 aa15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 SEC22AQ96IW7 307 aa15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 NXF2Q9GZY0 626 aaKnown RBP15.94■□□□□ 0.14
SMARCC2-210ENST00000550519 IGHV3-49A0A0A0MS15 119 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 TRAV14DV4A0A0A6YYC5 116 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 YIF1AO95070 293 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 PRSS3P35030 304 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 HRH1P35367 487 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 RPS19P39019 145 aaKnown RBP15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 TFPI2P48307 235 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 PHLDA2Q53GA4 152 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 SAMD12Q8N8I0 201 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 ZNF114Q8NC26 417 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 RARRES2Q99969 163 aa15.93■□□□□ 0.14
SMARCC2-210ENST00000550519 MT-CO2P00403 227 aa15.92■□□□□ 0.14
SMARCC2-210ENST00000550519 IGKV1-39P01597 117 aa15.92■□□□□ 0.14
SMARCC2-210ENST00000550519 IGKV1D-39P04432 117 aa15.92■□□□□ 0.14
SMARCC2-210ENST00000550519 HLA-DMAP28067 261 aa15.92■□□□□ 0.14
SMARCC2-210ENST00000550519 IGKV3-7A0A075B6H7 116 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 DEDDO75618 318 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 PRCDQ00LT1 54 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 KCTD21Q4G0X4 260 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 LPCAT3Q6P1A2 487 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 TBC1D26Q86UD7 250 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 OR4A16Q8NH70 328 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 GPX8Q8TED1 209 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 CMTM3Q96MX0 182 aa15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 C11orf68Q9H3H3 251 aaKnown RBP15.91■□□□□ 0.14
SMARCC2-210ENST00000550519 IGHV3OR16-13A0A075B7E8 117 aa15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 IGHV3-74A0A0B4J1X5 117 aa15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 IGHV3-48P01763 117 aa15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 S100GP29377 79 aa15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 HSPE1P61604 102 aaKnown RBP15.9■□□□□ 0.14
SMARCC2-210ENST00000550519 H2BFWTQ7Z2G1 175 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms