RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TAX1BP3O14907 124 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 CLDN18P56856 261 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 LINC00173Q6ZV60 143 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 OR4F17Q8NGA8 305 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
VDR-208ENST00000550325 CHRDL1Q9BU40 450 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 MPC1Q9Y5U8 109 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 MPDU1O75352 247 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 SRD5A2P31213 254 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 MORN2Q502X0 79 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 LRRC10Q5BKY1 277 aa10.04□□□□□ -0.8
VDR-208ENST00000550325 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 AHRRA9YTQ3 701 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 MMP23AO75900 390 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 PPBPP02775 128 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 MYOD1P15172 320 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 LTBRP36941 435 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 C1orf185Q5T7R7 199 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 MOB3BQ86TA1 216 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 ICE1Q9Y2F5 2266 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 COL6A3P12111 3177 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 C9JCJ5 164 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 FABP6P51161 128 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 VWC2Q2TAL6 325 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 ALKBH6Q3KRA9 238 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 COLCA1Q6ZS62 124 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 SPACA3Q8IXA5 215 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 SMRP1Q8NCR6 262 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 TNFRSF19Q9NS68 423 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 POLDIP2Q9Y2S7 368 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 CORTO00230 105 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 PPOXP50336 477 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 KRTAP27-1Q3LI81 207 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 KCNE4Q8WWG9 221 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 SAP30LQ9HAJ7 183 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
VDR-208ENST00000550325 RPL39P5Q59GN2 51 aa10.02□□□□□ -0.8
VDR-208ENST00000550325 Q5PR19 223 aa10.02□□□□□ -0.8
VDR-208ENST00000550325 LEAP2Q969E1 77 aa10.02□□□□□ -0.8
VDR-208ENST00000550325 RAB37Q96AX2 223 aa10.02□□□□□ -0.8
VDR-208ENST00000550325 ZNF430Q9H8G1 570 aaPredicted RBP10.02□□□□□ -0.8
VDR-208ENST00000550325 FZR1Q9UM11 496 aa10.02□□□□□ -0.8
VDR-208ENST00000550325 TRAV8-6A0A0B4J262 113 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 ZNF138P52744 262 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 OR52E5Q8NH55 327 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 SAA2-SAA4A0A096LPE2 208 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 IZUMO1RA6ND01 250 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 NPIPB11E5RHQ5 1161 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 DKK1O94907 266 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 TRIP6Q15654 476 aaKnown RBP10.02□□□□□ -0.81
VDR-208ENST00000550325 BVES-AS1Q5T3Y7 98 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 SARAFQ96BY9 339 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 NABP2Q9BQ15 211 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 OSTCQ9NRP0 149 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 TNRC18O15417 2968 aaPredicted RBP10.02□□□□□ -0.81
VDR-208ENST00000550325 PRR14LQ5THK1 2151 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 MUC6Q6W4X9 2439 aa10.02□□□□□ -0.81
VDR-208ENST00000550325 IGHV1-45A0A0A0MS14 117 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 IGHV5-10-1A0A0J9YXX1 117 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 COX19Q49B96 90 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 ZBTB34Q8NCN2 500 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 POM121L2Q96KW2 1035 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 SIT1Q9Y3P8 196 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 A0A1W2PQM1 296 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 OOEPA6NGQ2 149 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 B3GALT5-AS1P59052 145 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 WDR86Q86TI4 376 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 TCF19Q9Y242 345 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 LAMTOR5O43504 91 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 UBE2L3P68036 154 aaKnown RBP10.01□□□□□ -0.81
VDR-208ENST00000550325 FOXF2Q12947 444 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 OR1C1Q15619 314 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 SPINK14Q6IE38 97 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 DUSP13Q9UII6 198 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
VDR-208ENST00000550325 TRAV5A0A0B4J249 113 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 CELA3AP09093 270 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 SMIM12Q96EX1 92 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 S1PR3Q99500 378 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 TMEM167BQ9NRX6 74 aa10.01□□□□□ -0.81
VDR-208ENST00000550325 NBASA2RRP1 2371 aa10□□□□□ -0.81
VDR-208ENST00000550325 HIGD1CA8MV81 97 aa10□□□□□ -0.81
VDR-208ENST00000550325 GGTLC3B5MD39 225 aa10□□□□□ -0.81
VDR-208ENST00000550325 H0YJW9 148 aa10□□□□□ -0.81
VDR-208ENST00000550325 PLAUP00749 431 aa10□□□□□ -0.81
VDR-208ENST00000550325 TCF24Q7RTU0 167 aa10□□□□□ -0.81
VDR-208ENST00000550325 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
VDR-208ENST00000550325 CHODLQ9H9P2 273 aa10□□□□□ -0.81
VDR-208ENST00000550325 TMEM140Q9NV12 185 aa10□□□□□ -0.81
VDR-208ENST00000550325 HILPDAQ9Y5L2 63 aa10□□□□□ -0.81
VDR-208ENST00000550325 C7orf71A4D174 169 aa10□□□□□ -0.81
VDR-208ENST00000550325 FBLL1A6NHQ2 334 aaKnown RBP10□□□□□ -0.81
VDR-208ENST00000550325 SPINT2O43291 252 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms