RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 DLL1O00548 723 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 NKX2-8O15522 239 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGKV1-39P01597 117 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGKV1D-39P04432 117 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 IGHV1-2P23083 117 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 PPOXP50336 477 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 FOXL1Q12952 345 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 RIGQ13278 110 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 VWA1Q6PCB0 445 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 Q6ZT83 130 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 RBM14Q96PK6 669 aaKnown RBP8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 NEU1Q99519 415 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 TNFRSF19Q9NS68 423 aa8.53□□□□□ -1.04
SMARCC2-209ENST00000550164 TNFSF13O75888 250 aa8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 C5orf17Q8NAS9 161 aa8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 SSBP4Q9BWG4 385 aaPredicted RBP8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 SNHG12Q9BXW3 62 aa8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 SEPSECSQ9HD40 501 aaKnown RBP8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 CRIM1Q9NZV1 1036 aa8.52□□□□□ -1.04
SMARCC2-209ENST00000550164 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 STAG3L2P0CL84 134 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 STAG3L3P0CL85 134 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 DUTP33316 252 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 SELENOTP62341 195 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 FAM53AQ6NSI3 398 aaPredicted RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 SLC25A34Q6PIV7 304 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 SSC4DQ8WTU2 575 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 KCNS1Q96KK3 526 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 RASL11BQ9BPW5 248 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 NUP210Q8TEM1 1887 aaPredicted RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 LINC00473A8K010 186 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 CORTO00230 105 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 MOSP00540 346 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 BTF3P20290 206 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 S100A7P31151 101 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 GFRA1P56159 465 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 Q6P435 159 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 NCBP2LA6PVI3 153 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 IQCF6A8MYZ5 107 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 RBFOX2O43251 390 aaKnown RBP eCLIP8.52□□□□□ -1.057e-9■■□□□ 12.2
SMARCC2-209ENST00000550164 DLEU1O43261 78 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 PRSS1P07477 247 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 WDR82Q6UXN9 313 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 MRPS18CQ9Y3D5 142 aaKnown RBP8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 INSIG2Q9Y5U4 225 aa8.52□□□□□ -1.05
SMARCC2-209ENST00000550164 OR2J3O76001 311 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 ACP1P24666 158 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 RPL11P62913 178 aaKnown RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 RBPJQ06330 500 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 Q0VFX4 171 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 TRIP6Q15654 476 aaKnown RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 ACSF3Q4G176 576 aaPredicted RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 HAPLN4Q86UW8 402 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 MUC15Q8N387 334 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 WDR31Q8NA23 367 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 DEFB124Q8NES8 71 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 ZNF324O75467 553 aaPredicted RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 CLEC3BP05452 202 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 MORN2Q502X0 79 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 DNLZQ5SXM8 178 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 UNQ6494/PRO21346Q6UXR6 183 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 TMEM70Q9BUB7 260 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 ONECUT1Q9UBC0 465 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 BPTFQ12830 3046 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 TRBV6-6A0A0A6YYG2 114 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 TRAV3A0A0B4J244 114 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 FBLL1A6NHQ2 334 aaKnown RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 PRR33A8MZF0 331 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 MKRN2OSH3BPM6 223 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 K7ERU9 68 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 DTX1Q86Y01 620 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 ZNF714Q96N38 554 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 IFI27L2Q9H2X8 130 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 PROK2Q9HC23 129 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 POLR3KQ9Y2Y1 108 aaPredicted RBP8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 CACNA1BQ00975 2339 aa8.51□□□□□ -1.05
SMARCC2-209ENST00000550164 SNAI2O43623 268 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 FOXH1O75593 365 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 NUDT3O95989 172 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 TBR1Q16650 682 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 C19orf24Q9BVV8 132 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 PRR14LQ5THK1 2151 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 CREBBPQ92793 2442 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 OR4C46A6NHA9 309 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 ZNF785A8K8V0 405 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 IL18BPO95998 194 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 ZFP36L1Q07352 338 aaKnown RBP8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 LINC00305Q7Z4B0 112 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 TMEM144Q7Z5S9 345 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 FAM216BQ8N7L0 139 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 OR9G1Q8NH87 305 aa8.5□□□□□ -1.05
SMARCC2-209ENST00000550164 RNASEH2CQ8TDP1 164 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms