RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HSPB1P04792 205 aaKnown RBP3.81□□□□□ -1.8
SCAF11-212ENST00000549162 ZFP36P26651 326 aaKnown RBP3.81□□□□□ -1.8
SCAF11-212ENST00000549162 OR3A3P47888 321 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 PSMB3P49720 205 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 RPL30P62888 115 aaKnown RBP3.81□□□□□ -1.8
SCAF11-212ENST00000549162 LCE2CQ5TA81 110 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 FAM19A3Q7Z5A8 133 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 STXBP6Q8NFX7 210 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 OR10G9Q8NGN4 311 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 DCUN1D4Q92564 292 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 S1PR3Q99500 378 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 MANBALQ9NQG1 85 aa3.81□□□□□ -1.8
SCAF11-212ENST00000549162 FAT2Q9NYQ8 4349 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 PDZD2O15018 2839 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 TEX50A0A1B0GTY4 177 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 H3BRN7 92 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 PHOX2AO14813 284 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 RGS5O15539 181 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SAP30O75446 220 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CSN3P07498 182 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CRYBB3P26998 211 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 C5orf64Q2M2E5 130 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CCL19Q99731 98 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF702PQ9H963 129 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 PUS1Q9Y606 427 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SZT2Q5T011 3432 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 XIRP2A4UGR9 3374 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
SCAF11-212ENST00000549162 WRBO00258 174 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SERPINE2P07093 398 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 ESDP10768 282 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CRISP2P16562 243 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 AKR1C4P17516 323 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CD80P33681 288 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CDKN1BP46527 198 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CARTPTQ16568 116 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 RNASE12Q5GAN4 147 aaKnown RBP3.8□□□□□ -1.8
SCAF11-212ENST00000549162 Q6ZWC4 215 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 C4orf3Q8WVX3 66 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 C17orf77Q96MU5 243 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 TBX5Q99593 518 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 DOK5Q9P104 306 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 F5P12259 2224 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
SCAF11-212ENST00000549162 J3QRK9 145 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 K7EIM0 57 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 FCGR2CP31995 323 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 PIGPP57054 158 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SRSF3P84103 164 aaKnown RBP3.8□□□□□ -1.8
SCAF11-212ENST00000549162 UBE2V1Q13404 147 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 MADCAM1Q13477 382 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 VMO1Q7Z5L0 202 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 SLC35G3Q8N808 338 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 OR11H4Q8NGC9 324 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 CXorf58Q96LI9 332 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 S100A13Q99584 98 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
SCAF11-212ENST00000549162 A0A1W2PP11 408 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 TEX46H3BTG2 121 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 M0QZ24 198 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 NDUFA4O00483 81 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 ZNF546Q86UE3 836 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FGFRL1Q8N441 504 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 C6orf62Q9GZU0 229 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FBXL15Q9H469 300 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 NARFLQ9H6Q4 476 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 EHFQ9NZC4 300 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 PEF1Q9UBV8 284 aaKnown RBP3.79□□□□□ -1.8
SCAF11-212ENST00000549162 PITPNC1Q9UKF7 332 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 GON4LQ3T8J9 2241 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 WDR87Q6ZQQ6 2873 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FAM240BA0A1B0GVZ2 78 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 A0A1W2PRE2 83 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 STAG3L2P0CL84 134 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 IGLC2P0DOY2 106 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 GABRA2P47869 451 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 ANXA2RQ3ZCQ2 193 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 GCNT2Q8N0V5 402 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 OR1L1Q8NH94 360 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 UBE2E2Q96LR5 201 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 ST6GALNAC5Q9BVH7 336 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 DNAH7Q8WXX0 4024 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 NKX2-6A6NCS4 301 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 SYNGR2O43760 224 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FABP1P07148 127 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FCN2Q15485 313 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 PRAMEF6Q5VXH4 476 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 OR4A47Q6IF82 309 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 EIF5AL1Q6IS14 154 aaKnown RBP3.79□□□□□ -1.8
SCAF11-212ENST00000549162 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 TMUB2Q71RG4 321 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FAM168AQ92567 244 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 FAM167A-AS1Q96KT0 104 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 OR4C12Q96R67 309 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 VPREB3Q9UKI3 123 aa3.79□□□□□ -1.8
SCAF11-212ENST00000549162 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 MARCH11A6NNE9 402 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 I3L521 148 aa3.78□□□□□ -1.8
SCAF11-212ENST00000549162 TMEM50AO95807 157 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms