RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 REG1AP05451 166 aa22.67■■□□□ 1.22
BRF1-213ENST00000548421 SNCAP37840 140 aa22.67■■□□□ 1.22
BRF1-213ENST00000548421 RPL15P61313 204 aaKnown RBP22.67■■□□□ 1.22
BRF1-213ENST00000548421 ASPHD1Q5U4P2 390 aa22.67■■□□□ 1.22
BRF1-213ENST00000548421 STRAPQ9Y3F4 350 aaKnown RBP22.67■■□□□ 1.22
BRF1-213ENST00000548421 BOLA2-SMG1P6H3BVE0 249 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 ARPC5O15511 151 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 TCF21O43680 179 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 IGF1P05019 195 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 HNRNPCP07910 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
BRF1-213ENST00000548421 NUP62P37198 522 aaPredicted RBP22.66■■□□□ 1.22
BRF1-213ENST00000548421 CRIP2P52943 208 aaPredicted RBP22.66■■□□□ 1.22
BRF1-213ENST00000548421 BSXQ3C1V8 233 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 INO80EQ8NBZ0 244 aaPredicted RBP22.66■■□□□ 1.22
BRF1-213ENST00000548421 TMEM68Q96MH6 324 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 OR4C12Q96R67 309 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 FAM24AA6NFZ4 105 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 AP4M1O00189 453 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 NPY1RP25929 384 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 TMEM267Q0VDI3 215 aaPredicted RBP22.66■■□□□ 1.22
BRF1-213ENST00000548421 ECSCRQ19T08 205 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 ZNF114Q8NC26 417 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 SLC25A31Q9H0C2 315 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 ZNF702PQ9H963 129 aa22.66■■□□□ 1.22
BRF1-213ENST00000548421 RNASE2P10153 161 aaKnown RBP22.65■■□□□ 1.22
BRF1-213ENST00000548421 RPL12P30050 165 aaKnown RBP22.65■■□□□ 1.22
BRF1-213ENST00000548421 ATP5IP56385 69 aaPredicted RBP22.65■■□□□ 1.22
BRF1-213ENST00000548421 AKIRIN2Q53H80 203 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 UNQ5815/PRO19632Q6UWF5 114 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 TMEM14EPQ6UXP3 125 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 TMEM252Q8N6L7 170 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 AQP10Q96PS8 301 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 NF1P21359 2839 aa22.65■■□□□ 1.22
BRF1-213ENST00000548421 C15orf62A8K5M9 175 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 NPIPB5A8MRT5 1133 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 HKR1P10072 659 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 CTRB1P17538 263 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 SUB1P53999 127 aaKnown RBP eCLIP22.64■■□□□ 1.21
BRF1-213ENST00000548421 C2orf83Q53S99 150 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 CTRB2Q6GPI1 263 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 TTC9CQ8N5M4 171 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 P2RX4Q99571 388 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 ZNF580Q9UK33 172 aa22.64■■□□□ 1.21
BRF1-213ENST00000548421 PAIP2BQ9ULR5 123 aaKnown RBP22.64■■□□□ 1.21
BRF1-213ENST00000548421 IGSF23A1L1A6 192 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 RNF222A6NCQ9 220 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 CRYGCP07315 174 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 RAB11AP62491 216 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 ARSJQ5FYB0 599 aaPredicted RBP22.63■■□□□ 1.21
BRF1-213ENST00000548421 Q8N2B8 174 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 TMEM170AQ8WVE7 144 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 MFFQ9GZY8 342 aa22.63■■□□□ 1.21
BRF1-213ENST00000548421 TRAV41A0A0B4J266 112 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 G3V318 75 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 CRYBA1P05813 215 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 OR8U8P0C7N1 319 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 METTL15P1P0C7V9 234 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 ACOT7LQ6ZUV0 252 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 STX12Q86Y82 276 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 OR1P1Q8NH06 330 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 ZC4H2Q9NQZ6 224 aa22.62■■□□□ 1.21
BRF1-213ENST00000548421 F11RQ9Y624 299 aaKnown RBP22.62■■□□□ 1.21
BRF1-213ENST00000548421 FBXO24O75426 580 aa22.61■■□□□ 1.21
BRF1-213ENST00000548421 EIF2B2P49770 351 aaKnown RBP22.61■■□□□ 1.21
BRF1-213ENST00000548421 EWSR1Q01844 656 aaKnown RBP eCLIP22.61■■□□□ 1.21
BRF1-213ENST00000548421 LINC00527Q9UJ94 153 aa22.61■■□□□ 1.21
BRF1-213ENST00000548421 NIPBLQ6KC79 2804 aaeCLIP22.61■■□□□ 1.21
BRF1-213ENST00000548421 SULT1A1P50225 295 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 NKX2-5P52952 324 aaPredicted RBP22.6■■□□□ 1.21
BRF1-213ENST00000548421 BAXQ07812 192 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 TMEM95Q3KNT9 176 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 C19orf54Q5BKX5 351 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 FAM110DQ8TAY7 271 aaPredicted RBP22.6■■□□□ 1.21
BRF1-213ENST00000548421 NOL4LQ96MY1 436 aaPredicted RBP22.6■■□□□ 1.21
BRF1-213ENST00000548421 WNT10AQ9GZT5 417 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 CST7O76096 145 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 DEFA4P12838 97 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 AP2S1P53680 142 aaPredicted RBP22.6■■□□□ 1.21
BRF1-213ENST00000548421 OR2F1Q13607 317 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 ZNF345Q14585 488 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 C19orf35Q6ZS72 473 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 STPG2Q8N412 459 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 OR5T1Q8NG75 326 aa22.6■■□□□ 1.21
BRF1-213ENST00000548421 SCAF4O95104 1147 aaKnown RBP22.59■■□□□ 1.21
BRF1-213ENST00000548421 IFNA4P05014 189 aa22.59■■□□□ 1.21
BRF1-213ENST00000548421 ETV3LQ6ZN32 361 aa22.59■■□□□ 1.21
BRF1-213ENST00000548421 Q6ZSV7 163 aa22.59■■□□□ 1.21
BRF1-213ENST00000548421 OR1L6Q8NGR2 347 aa22.59■■□□□ 1.21
BRF1-213ENST00000548421 HSPB11Q9Y547 144 aa22.59■■□□□ 1.21
BRF1-213ENST00000548421 TSPAN9O75954 239 aa22.58■■□□□ 1.2
BRF1-213ENST00000548421 CXCL2P19875 107 aa22.58■■□□□ 1.2
BRF1-213ENST00000548421 NHLH2Q02577 135 aa22.58■■□□□ 1.2
BRF1-213ENST00000548421 OR8G2PQ6IF36 304 aa22.58■■□□□ 1.2
BRF1-213ENST00000548421 PMS2P5A8MQ11 134 aa22.57■■□□□ 1.2
BRF1-213ENST00000548421 LGALSLQ3ZCW2 172 aaPredicted RBP22.57■■□□□ 1.2
BRF1-213ENST00000548421 PVRIGQ6DKI7 326 aa22.57■■□□□ 1.2
BRF1-213ENST00000548421 C9orf62Q8N4C0 152 aa22.57■■□□□ 1.2
BRF1-213ENST00000548421 OR2T6Q8NHC8 308 aa22.57■■□□□ 1.2
BRF1-213ENST00000548421 CYB5BO43169 146 aa22.56■■□□□ 1.2
BRF1-213ENST00000548421 MFAP2P55001 183 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms