RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 IGHV2-26A0A0B4J1V2 119 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 LINC00587B1AMM8 73 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 C17orf112F2Z3M2 114 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 C19orf84I3L1E1 186 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 PPIAL4GP0DN37 164 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 NPPCP23582 126 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 RPL8P62917 257 aaKnown RBP8.96□□□□□ -0.97
CUX1-212ENST00000547394 WT1-ASQ06250 92 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 CENPVQ7Z7K6 275 aaPredicted RBP8.96□□□□□ -0.97
CUX1-212ENST00000547394 OR5AN1Q8NGI8 311 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 Q8WTZ3 238 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 TMEM133Q9H2Q1 129 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 GAB2Q9UQC2 676 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 HILPDAQ9Y5L2 63 aa8.96□□□□□ -0.97
CUX1-212ENST00000547394 CGB1A6NKQ9 187 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 RAB5AP20339 215 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 RPS10P46783 165 aaKnown RBP8.96□□□□□ -0.98
CUX1-212ENST00000547394 RPP30P78346 268 aaKnown RBP8.96□□□□□ -0.98
CUX1-212ENST00000547394 PRCDQ00LT1 54 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 RHEBQ15382 184 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 ACOT6Q3I5F7 207 aaPredicted RBP8.96□□□□□ -0.98
CUX1-212ENST00000547394 FBLN7Q53RD9 439 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 ST6GALNAC6Q969X2 333 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 SPOCK3Q9BQ16 436 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 PARD6GQ9BYG4 376 aaPredicted RBP8.96□□□□□ -0.98
CUX1-212ENST00000547394 PRNDQ9UKY0 176 aa8.96□□□□□ -0.98
CUX1-212ENST00000547394 FAM90A9PA6NNJ1 464 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 CYB5BO43169 146 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 PSMB3P49720 205 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 S100A12P80511 92 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 WDR25Q64LD2 544 aaPredicted RBP8.95□□□□□ -0.98
CUX1-212ENST00000547394 C15orf54Q8N8G6 183 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 MRPL36Q9P0J6 103 aaKnown RBP8.95□□□□□ -0.98
CUX1-212ENST00000547394 C11orf94C9JXX5 98 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 IGLV2-23P01705 113 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 IGHV2-70P01814 119 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
CUX1-212ENST00000547394 PPOXP50336 477 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 FBXL19-AS1Q494R0 122 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 TEPPQ6URK8 271 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 SLC35E3Q7Z769 313 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 PARLQ9H300 379 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 UBTD1Q9HAC8 227 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 NPVFQ9HCQ7 196 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 NIT2Q9NQR4 276 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 KAAG1Q9UBP8 84 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 ZANQ9Y493 2812 aa8.95□□□□□ -0.98
CUX1-212ENST00000547394 C5orf52A6NGY3 159 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 S100A9P06702 114 aaKnown RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 RNASE2P10153 161 aaKnown RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 OR10J1P30954 320 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 FABP9Q0Z7S8 132 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 GAMTQ14353 236 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 RNF212Q495C1 297 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 MIR17HGQ75NE6 70 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 OR4C13Q8NGP0 309 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 LSM4Q9Y4Z0 139 aaKnown RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 FABP1P07148 127 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 OR10J4P0C629 311 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 ASPHD1Q5U4P2 390 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 OR4P4Q8NGL7 312 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 UNKLQ9H9P5 680 aaKnown RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 WASHC3Q9Y3C0 194 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 ABCA12Q86UK0 2595 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 IFNA1P01562 189 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 MBP02144 154 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 MT-ND4LP03901 98 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 FOLR2P14207 255 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 AREGP15514 252 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 POU2AF1Q16633 256 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 C4orf17Q53FE4 359 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 FAM78BQ5VT40 261 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 MORN5Q5VZ52 161 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 ELOVL1Q9BW60 279 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 GSX1Q9H4S2 264 aaPredicted RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 FNDC4Q9H6D8 234 aaPredicted RBP8.94□□□□□ -0.98
CUX1-212ENST00000547394 BET1LQ9NYM9 111 aa8.94□□□□□ -0.98
CUX1-212ENST00000547394 TRAV20A0A0B4J274 112 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 FCN1O00602 326 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 NDUFB4O95168 129 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 ELOBQ15370 118 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 TNXAQ16473 311 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 SPNS3Q6ZMD2 512 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 ZNF114Q8NC26 417 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 OSR1Q8TAX0 266 aaPredicted RBP8.93□□□□□ -0.98
CUX1-212ENST00000547394 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 FBXL15Q9H469 300 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 SMDT1Q9H4I9 107 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 SDF2L1Q9HCN8 221 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 YTHDF2Q9Y5A9 579 aaKnown RBP8.93□□□□□ -0.98
CUX1-212ENST00000547394 INSIG2Q9Y5U4 225 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 TRAV5A0A0B4J249 113 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 A0A1W2PPI3 338 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 OPRK1P41145 380 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 ZNF90Q03938 601 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 TMEM177Q53S58 311 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 TMEM186Q96B77 213 aa8.93□□□□□ -0.98
CUX1-212ENST00000547394 LPAR2Q9HBW0 351 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms