RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 J3QR06 171 aa8.84□□□□□ -0.99
NPAS3-205ENST00000547068 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
NPAS3-205ENST00000547068 B3GALT5-AS1P59052 145 aa8.84□□□□□ -0.99
NPAS3-205ENST00000547068 RPL8P62917 257 aaKnown RBP8.84□□□□□ -0.99
NPAS3-205ENST00000547068 C6orf15Q6UXA7 325 aaPredicted RBP8.84□□□□□ -0.99
NPAS3-205ENST00000547068 WDR31Q8NA23 367 aa8.84□□□□□ -0.99
NPAS3-205ENST00000547068 CACNA1DQ01668 2161 aa8.84□□□□□ -0.99
NPAS3-205ENST00000547068 hDV102S1A0JD36 115 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 C9orf172C9J069 976 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 PRSS46E5RG02 174 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 SS18L1O75177 396 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 ACTL6BO94805 426 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 SSR4P51571 173 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 KLF5Q13887 457 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 PCOLCEQ15113 449 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 NRN1LQ496H8 165 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 ABHD12Q8N2K0 398 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 OR2T6Q8NHC8 308 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 GCM1Q9NP62 436 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 MED12LQ86YW9 2145 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 FREM1Q5H8C1 2179 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 TRAV8-6A0A0B4J262 113 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 A0A1W2PNU3 283 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 C12orf77C9JDV5 145 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 CD5LO43866 347 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 MRPL33O75394 65 aaKnown RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 SAP30O75446 220 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 IGLV2-8P01709 118 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 MFAP2P55001 183 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 PRAMEF5Q5TYX0 476 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 PRAMEF6Q5VXH4 476 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 RASL11AQ6T310 242 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 TEPPQ6URK8 271 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 MIR17HGQ75NE6 70 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 OR4A16Q8NH70 328 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 WIPF2Q8TF74 440 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 SSBP3Q9BWW4 388 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 AKIRIN1Q9H9L7 192 aaPredicted RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 TMEM167BQ9NRX6 74 aa8.83□□□□□ -1
NPAS3-205ENST00000547068 PEF1Q9UBV8 284 aaKnown RBP8.83□□□□□ -1
NPAS3-205ENST00000547068 PTPRBP23467 1997 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 ZNF503-AS2A6NEH8 195 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 HBZP02008 142 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 NBEAP1P0C6P0 100 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 GPR6P46095 362 aaPredicted RBP8.82□□□□□ -1
NPAS3-205ENST00000547068 FAM168AQ92567 244 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 SARAFQ96BY9 339 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 C1orf159Q96HA4 380 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 ZNF430Q9H8G1 570 aaPredicted RBP8.82□□□□□ -1
NPAS3-205ENST00000547068 RAB31Q13636 194 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 Q8IYB0 196 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 HSD17B10Q99714 261 aaKnown RBP8.82□□□□□ -1
NPAS3-205ENST00000547068 COMMD5Q9GZQ3 224 aa8.82□□□□□ -1
NPAS3-205ENST00000547068 TMEM30CPA0ZSE6 113 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 VDAC2P45880 294 aaPredicted RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 CEBPDP49716 269 aaPredicted RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 PPOXP50336 477 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 GDF5OSQ5U4N7 250 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 ASPHD1Q5U4P2 390 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 TRIB1Q96RU8 372 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 SSBP4Q9BWG4 385 aaPredicted RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 OOEPA6NGQ2 149 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 SYS1-DBNDD2H3BUS1 97 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 IGLC1P0CG04 106 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 ARR3P36575 388 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 FOXC1Q12948 553 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 C1orf185Q5T7R7 199 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 IGF2BP2-AS1Q96M15 143 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 SPRY4Q9C004 299 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 WDR54Q9H977 334 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 SLC25A10Q9UBX3 287 aaPredicted RBP8.81□□□□□ -1
NPAS3-205ENST00000547068 POLDIP2Q9Y2S7 368 aa8.81□□□□□ -1
NPAS3-205ENST00000547068 HCFC1P51610 2035 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 A0A0G2JMM0 328 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 IGHV3-64DA0A0J9YX35 117 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 A0A1W2PPB8 328 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 GAGE10A6NGK3 116 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 SH2D7A6NKC9 451 aaPredicted RBP8.8□□□□□ -1
NPAS3-205ENST00000547068 KIR3DP1A8MWS1 328 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 OR7C2O60412 319 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 PSPNO60542 156 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 FCGR3BO75015 233 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 FOXG1P55316 489 aaPredicted RBP8.8□□□□□ -1
NPAS3-205ENST00000547068 ERVK11-1P61568 191 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 ZNF146Q15072 292 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 SMIM21Q3B7S5 101 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 WIPI1Q5MNZ9 446 aaPredicted RBP8.8□□□□□ -1
NPAS3-205ENST00000547068 VWA1Q6PCB0 445 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 IGF2-ASQ6U949 168 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 ZNF841Q6ZN19 808 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 FER1L6-AS1Q8NA97 138 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 SLC25A40Q8TBP6 338 aa8.8□□□□□ -1
NPAS3-205ENST00000547068 ZC2HC1AQ96GY0 325 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms