RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 ZNF66Q6ZN08 573 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 GPR141Q7Z602 305 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 GDPD1Q8N9F7 314 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 TMEM116Q8NCL8 245 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 SLC25A38Q96DW6 304 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
TMEM258-208ENST00000545210 QTRT1Q9BXR0 403 aaKnown RBP8.35□□□□□ -1.07
TMEM258-208ENST00000545210 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 C15orf61A6NNL5 157 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 UPK2O00526 184 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 CYB5BO43169 146 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 OR13C7P0DN81 318 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 PTHLHP12272 177 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 RANBP1P43487 201 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 WT1-ASQ06250 92 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 CTF1Q16619 201 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 PVRIGQ6DKI7 326 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 SPAG16Q8N0X2 631 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 POM121L12Q8N7R1 296 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 SCARB1Q8WTV0 552 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 SRSF8Q9BRL6 282 aaKnown RBP8.34□□□□□ -1.07
TMEM258-208ENST00000545210 AIFM2Q9BRQ8 373 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 RHBDL2Q9NX52 303 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 PLA2G2EQ9NZK7 142 aa8.34□□□□□ -1.07
TMEM258-208ENST00000545210 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
TMEM258-208ENST00000545210 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 METTL21EPA6NDL7 271 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 SULT1C2O00338 296 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 FCER2P06734 321 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CTSGP08311 255 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CDNFQ49AH0 187 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 Q56UQ5 140 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 LEMD1Q68G75 181 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CNIH2Q6PI25 160 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CLVS1Q8IUQ0 354 aaPredicted RBP8.33□□□□□ -1.08
TMEM258-208ENST00000545210 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 ZNF414Q96IQ9 312 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CMTM3Q96MX0 182 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 RNF126Q9BV68 326 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 CCL28Q9NRJ3 127 aa8.33□□□□□ -1.08
TMEM258-208ENST00000545210 TRAV18A0A075B6X5 111 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TEX50A0A1B0GTY4 177 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TMEM235A6NFC5 223 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 YIF1AO95070 293 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 GABARAPO95166 117 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 P0DMU3 169 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 NQO2P16083 231 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TAS2R31P59538 309 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 SPCS2Q15005 226 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 HACD4Q5VWC8 232 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 FAM90A2PQ658T7 463 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 CENPSQ8N2Z9 138 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 SAMD12Q8N8I0 201 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 DMBX1Q8NFW5 382 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 NUDCD2Q8WVJ2 157 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 GIMAP1Q8WWP7 306 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 SLC25A46Q96AG3 418 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 ATP6V0BQ99437 205 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 DCSTAMPQ9H295 470 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 TMEM140Q9NV12 185 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 ANXA10Q9UJ72 324 aa8.32□□□□□ -1.08
TMEM258-208ENST00000545210 ELOA3CA0A087WX78 387 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 TRAV14DV4A0A0A6YYC5 116 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 K7EIM0 57 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 NUPL2O15504 423 aaKnown RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 RBFOX2O43251 390 aaKnown RBP eCLIP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 SSX5O60225 188 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 HPRT1P00492 218 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 EIF4EP06730 217 aaKnown RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 MIFP14174 115 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 DEFB131AP59861 70 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 PAFAH1B2P68402 229 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 RELQ04864 619 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 ARL6IP1Q15041 203 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 POU2AF1Q16633 256 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 ZNF767PQ75MW2 155 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 TCF24Q7RTU0 167 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 HSD17B13Q7Z5P4 300 aaPredicted RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 STHQ8IWL8 128 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 OR10C1Q96KK4 312 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
TMEM258-208ENST00000545210 F11RQ9Y624 299 aaKnown RBP8.31□□□□□ -1.08
TMEM258-208ENST00000545210 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
TMEM258-208ENST00000545210 DEFB131BA0A096LNP1 70 aa8.3□□□□□ -1.08
TMEM258-208ENST00000545210 MEIS3P1A6NDR6 274 aa8.3□□□□□ -1.08
TMEM258-208ENST00000545210 DNASE2O00115 360 aaPredicted RBP8.3□□□□□ -1.08
TMEM258-208ENST00000545210 HPGDSO60760 199 aa8.3□□□□□ -1.08
TMEM258-208ENST00000545210 AMBPP02760 352 aa8.3□□□□□ -1.08
TMEM258-208ENST00000545210 FGF2P09038 288 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms