RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 MRGPRFQ96AM1 343 aa9□□□□□ -0.97
HDAC4-216ENST00000544989 RRNAD1Q96FB5 475 aaKnown RBP9□□□□□ -0.97
HDAC4-216ENST00000544989 CACFD1Q9UGQ2 172 aa9□□□□□ -0.97
HDAC4-216ENST00000544989 NSG2Q9Y328 171 aa9□□□□□ -0.97
HDAC4-216ENST00000544989 ANKRD20A5PA0PJZ0 165 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 PPP5D1E7EU14 171 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 IGKV1-39P01597 117 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 IGKV1D-39P04432 117 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 TNFSF8P32971 234 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 ERHP84090 104 aaKnown RBP8.99□□□□□ -0.97
HDAC4-216ENST00000544989 PRCDQ00LT1 54 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 DHODHQ02127 395 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 TRIM16LQ309B1 348 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 PLET1Q6UQ28 207 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 OR4C16Q8NGL9 310 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 MARCH1Q8TCQ1 289 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 DYNLRB2Q8TF09 96 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 MARC2Q969Z3 335 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
HDAC4-216ENST00000544989 SOSTQ9BQB4 213 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 PDCD10Q9BUL8 212 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 SLC2A8Q9NY64 477 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 DMRT1Q9Y5R6 373 aa8.99□□□□□ -0.97
HDAC4-216ENST00000544989 TEX13DA0A0J9YY54 714 aaPredicted RBP8.98□□□□□ -0.97
HDAC4-216ENST00000544989 MFSD2BA6NFX1 497 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 A8MWP6 167 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 A8MZ25 164 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 INS-IGF2F8WCM5 200 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 OR2C1O95371 312 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 PI3P19957 117 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 UCP1P25874 307 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 SUB1P53999 127 aaKnown RBP eCLIP8.98□□□□□ -0.97
HDAC4-216ENST00000544989 ELLP55199 621 aaPredicted RBP8.98□□□□□ -0.97
HDAC4-216ENST00000544989 C19orf35Q6ZS72 473 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 OR2C3Q8N628 320 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 RNASE11Q8TAA1 199 aaKnown RBP8.98□□□□□ -0.97
HDAC4-216ENST00000544989 TP53RKQ96S44 253 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 TMEM222Q9H0R3 208 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 PLEKHA3Q9HB20 300 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 C21orf62Q9NYP8 219 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 KCNIP3Q9Y2W7 256 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 UFC1Q9Y3C8 167 aa8.98□□□□□ -0.97
HDAC4-216ENST00000544989 ZNF320A2RRD8 509 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 C2orf70A6NJV1 201 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 TGOLN2O43493 480 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 IGHV3-23P01764 117 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 FOLR2P14207 255 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 GPR183P32249 361 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 SLC35G3Q8N808 338 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 RBPMSQ93062 196 aaKnown RBP8.97□□□□□ -0.97
HDAC4-216ENST00000544989 TXN2Q99757 166 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 THAP7Q9BT49 309 aaPredicted RBP8.97□□□□□ -0.97
HDAC4-216ENST00000544989 NAA60Q9H7X0 242 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 ENY2Q9NPA8 101 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 GPR132Q9UNW8 380 aa8.97□□□□□ -0.97
HDAC4-216ENST00000544989 CORTO00230 105 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 CDS2O95674 445 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 IFNA17P01571 189 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 HLA-AP01891 365 aaKnown RBP8.96□□□□□ -0.98
HDAC4-216ENST00000544989 P0C879 139 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 FCGR2BP31994 310 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-216ENST00000544989 SNCAP37840 140 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 RELQ04864 619 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-216ENST00000544989 DEFB114Q30KQ6 69 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 PYDC2Q56P42 97 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 SPANXN2Q5MJ10 180 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 FAAP20Q6NZ36 180 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 OR51S1Q8NGJ8 323 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 IL22RA2Q969J5 263 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 RTBDNQ9BSG5 229 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-216ENST00000544989 ZNF436Q9C0F3 470 aaPredicted RBP8.96□□□□□ -0.98
HDAC4-216ENST00000544989 C5orf66Q9H5L9 145 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 ZMAT4Q9H898 229 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 ZC4H2Q9NQZ6 224 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 MCUBQ9NWR8 336 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 U3KQK5 164 aa8.96□□□□□ -0.98
HDAC4-216ENST00000544989 DNAH1Q9P2D7 4330 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 A0A0B4J293 547 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 OR2T8A6NH00 312 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 CRYM-AS1A6NIL9 109 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 DBX1A6NMT0 343 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 NDUFA4O00483 81 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 SCGB2A1O75556 95 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 IGKV1-5P01602 117 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 OR5AC1P0C628 307 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 FRMD6-AS1P0C7T7 363 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 IGHV4-30-4P0DP06 118 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 ANXA3P12429 323 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 CBLN1P23435 193 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 MFAP4P55083 255 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 SRPXP78539 464 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 ANKRD55Q3KP44 614 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 SP6Q3SY56 376 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 CD300EQ496F6 205 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 Q56UQ5 140 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 ZNF57Q68EA5 555 aaPredicted RBP8.95□□□□□ -0.98
HDAC4-216ENST00000544989 HAPLN4Q86UW8 402 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 TOMM5Q8N4H5 51 aa8.95□□□□□ -0.98
HDAC4-216ENST00000544989 OR52E5Q8NH55 327 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms