RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 C5orf51A6NDU8 294 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 EIF4EBP3O60516 100 aaPredicted RBP10.22□□□□□ -0.77
DDX11-227ENST00000544652 NXPH3O95157 252 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 ELANEP08246 267 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 APELAP0DMC3 54 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 NKX2-1P43699 371 aaPredicted RBP10.22□□□□□ -0.77
DDX11-227ENST00000544652 H2BFSP57053 126 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 KRTAP10-3P60369 221 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 RRAS2P62070 204 aaPredicted RBP10.22□□□□□ -0.77
DDX11-227ENST00000544652 FOXE3Q13461 319 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 BSXQ3C1V8 233 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 TEX38Q6PEX7 206 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 ZNF329Q86UD4 541 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 OR5T1Q8NG75 326 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 OR11H7Q8NGC8 314 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 MYOZ3Q8TDC0 251 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 HINT2Q9BX68 163 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 NMES1Q9C002 83 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 MED28Q9H204 178 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 RBKSQ9H477 322 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 MGAT4CQ9UBM8 478 aa10.22□□□□□ -0.77
DDX11-227ENST00000544652 hCG_2014768A0A024R1R8 64 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 TRBV9A0A0B4J1U6 114 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 FAM25EA8MYX2 175 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 SYNGR2O43760 224 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 MED6O75586 246 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 SIX6O95475 246 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 OR13C7P0DN81 318 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 CXCL3P19876 107 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 ERHP84090 104 aaKnown RBP10.21□□□□□ -0.77
DDX11-227ENST00000544652 FCN2Q15485 313 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 SPINK9Q5DT21 86 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 PVRIGQ6DKI7 326 aa10.21□□□□□ -0.77
DDX11-227ENST00000544652 SETD2Q9BYW2 2564 aaPredicted RBP10.21□□□□□ -0.78
DDX11-227ENST00000544652 JMJD1CQ15652 2540 aa10.21□□□□□ -0.78
DDX11-227ENST00000544652 IGLV11-55A0A075B6I3 123 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 CEBPZOSA8MTT3 80 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 REG1AP05451 166 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 HOXA1P49639 335 aaPredicted RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 CYCSP99999 105 aaKnown RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 KIAA0141Q14154 515 aaPredicted RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 LILRB2Q8N423 598 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 OR4X2Q8NGF9 303 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 FANCD2OSQ96PS1 177 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 P2RX4Q99571 388 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 SLA2Q9H6Q3 261 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 ENY2Q9NPA8 101 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 GSKIPQ9P0R6 139 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 RCL1Q9Y2P8 373 aaKnown RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 DMRT1Q9Y5R6 373 aa10.2□□□□□ -0.78
DDX11-227ENST00000544652 F11RQ9Y624 299 aaKnown RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 FBN1P35555 2871 aaKnown RBP10.2□□□□□ -0.78
DDX11-227ENST00000544652 K7EPK0 472 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 LY86O95711 162 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 RNASE2P10153 161 aaKnown RBP10.19□□□□□ -0.78
DDX11-227ENST00000544652 HIST1H1BP16401 226 aaKnown RBP10.19□□□□□ -0.78
DDX11-227ENST00000544652 HTR2BP41595 481 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 RAB9AP51151 201 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 MFAP2P55001 183 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 POLR2GP62487 172 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDX11-227ENST00000544652 CD83Q01151 205 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 C19orf35Q6ZS72 473 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 OR1L6Q8NGR2 347 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 OR1P1Q8NH06 330 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 WDR89Q96FK6 387 aaPredicted RBP10.19□□□□□ -0.78
DDX11-227ENST00000544652 MDFIQ99750 246 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 CITED1Q99966 193 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 KLK15Q9H2R5 256 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 HIPK2Q9H2X6 1198 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 C11orf1Q9H5F2 150 aa10.19□□□□□ -0.78
DDX11-227ENST00000544652 PF4V1P10720 104 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 CD28P10747 220 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 PAX9P55771 341 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 ATP5IP56385 69 aaPredicted RBP10.18□□□□□ -0.78
DDX11-227ENST00000544652 C2orf83Q53S99 150 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 C11orf87Q6NUJ2 197 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 SLC24A4Q8NFF2 622 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 ASB13Q8WXK3 278 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 SMIM8Q96KF7 97 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 CIB3Q96Q77 187 aaPredicted RBP10.18□□□□□ -0.78
DDX11-227ENST00000544652 RAB40CQ96S21 281 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 ZNF747Q9BV97 191 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 HEYLQ9NQ87 328 aaPredicted RBP10.18□□□□□ -0.78
DDX11-227ENST00000544652 ZFP57Q9NU63 452 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 U3KQ87 197 aa10.18□□□□□ -0.78
DDX11-227ENST00000544652 FAM223BA6NKX1 122 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 WRBO00258 174 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 CYB5BO43169 146 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 SCGB1D2O95969 90 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 PRH1P02810 166 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 TRGV3P03979 118 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 DEFA4P12838 97 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 SNCAP37840 140 aa10.17□□□□□ -0.78
DDX11-227ENST00000544652 SUB1P53999 127 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX11-227ENST00000544652 TAS2R30P59541 319 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms