RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 MRPL14Q6P1L8 145 aaKnown RBP4.13□□□□□ -1.75
LMO3-229ENST00000543721 IMMP1LQ96LU5 166 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 NABP2Q9BQ15 211 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 PROK2Q9HC23 129 aa4.13□□□□□ -1.75
LMO3-229ENST00000543721 DNAH12Q6ZR08 3092 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 FER1L5A0AVI2 2057 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 A8MWL6 223 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 IGLV2-8P01709 118 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OTX2P32243 289 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 HSPE1P61604 102 aaKnown RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 SLC35B1P78383 322 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 C9orf135Q5VTT2 229 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 SAMD13Q5VXD3 122 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OR1N2Q8NGR9 330 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 NEUROG1Q92886 237 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 TMEM186Q96B77 213 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 S1PR3Q99500 378 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 PLSCR4Q9NRQ2 329 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 ARHGAP21Q5T5U3 1957 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 IGHV1-45A0A0A0MS14 117 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 K7EP34 96 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 SIVA1O15304 175 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 APOA2P02652 100 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 BRWD1-AS2P59051 145 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 SPINK9Q5DT21 86 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 WIPI1Q5MNZ9 446 aaPredicted RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 MIR17HGQ75NE6 70 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 SPATA12Q7Z6I5 190 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 YRDCQ86U90 279 aaKnown RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 ZNF784Q8NCA9 323 aaPredicted RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 NUP35Q8NFH5 326 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OR9G4Q8NGQ1 327 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OR1B1Q8NGR6 318 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 PPP1R35Q8TAP8 253 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 H1FXQ92522 213 aaKnown RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 ADTRPQ96IZ2 230 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 PRDM6Q9NQX0 595 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 JKAMPQ9P055 326 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 UTRNP46939 3433 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 FCGR3BO75015 233 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 CSN1S1P47710 185 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 FOXL2P58012 376 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 RPL8P62917 257 aaKnown RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 SPATA31B1PQ5VZV4 182 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 MTURNQ8N3F0 131 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OR4X2Q8NGF9 303 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 OR2K2Q8NGT1 345 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 NDFIP1Q9BT67 221 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 PHF7Q9BWX1 381 aaPredicted RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 GFRA4Q9GZZ7 299 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 JPT1Q9UK76 154 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 PSG11Q9UQ72 335 aa4.12□□□□□ -1.75
LMO3-229ENST00000543721 FOXA2Q9Y261 457 aaPredicted RBP4.12□□□□□ -1.75
LMO3-229ENST00000543721 TRAV8-6A0A0B4J262 113 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 A0A1B0GXF2 115 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 C15orf61A6NNL5 157 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 FOXH1O75593 365 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 MYF5P13349 255 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 GPR6P46095 362 aaPredicted RBP4.11□□□□□ -1.75
LMO3-229ENST00000543721 HSD52Q0P140 79 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 TBC1D28Q2M2D7 210 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 C1orf185Q5T7R7 199 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 FA2HQ7L5A8 372 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 STXBP6Q8NFX7 210 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 OR1L4Q8NGR5 311 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 UBALD1Q8TB05 177 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 IDI2-AS1Q9NZ38 188 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 CRIM1Q9NZV1 1036 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 PRNDQ9UKY0 176 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 AMMECR1Q9Y4X0 333 aaPredicted RBP4.11□□□□□ -1.75
LMO3-229ENST00000543721 LINC00473A8K010 186 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 SP1P08047 785 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 PLA2G5P39877 138 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 NHLH1Q02575 133 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 MZT1Q08AG7 82 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 FOXF2Q12947 444 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 LINC01545Q5VT33 79 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 ABHD12Q8N2K0 398 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.11□□□□□ -1.75
LMO3-229ENST00000543721 VSTM2AQ8TAG5 236 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 C5orf30Q96GV9 206 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 GUCD1Q96NT3 240 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 TMEM140Q9NV12 185 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 CLEC5AQ9NY25 188 aa4.11□□□□□ -1.75
LMO3-229ENST00000543721 BOKQ9UMX3 212 aaPredicted RBP4.11□□□□□ -1.75
LMO3-229ENST00000543721 IGHV1-24A0A0C4DH33 117 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 GGTLC3B5MD39 225 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 ACTL6BO94805 426 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 IGFBP2P18065 325 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 RIPPLY3P57055 190 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 PLP1P60201 277 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 UBE2L3P68036 154 aaKnown RBP4.1□□□□□ -1.75
LMO3-229ENST00000543721 IL11RAQ14626 422 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 SPEM1Q8N4L4 309 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 C5orf17Q8NAS9 161 aa4.1□□□□□ -1.75
LMO3-229ENST00000543721 OR10AG1Q8NH19 301 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms