RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 GPX8Q8TED1 209 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 COMMD3Q9UBI1 195 aa9.82□□□□□ -0.84
RTN3-213ENST00000543552 OR4C46A6NHA9 309 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 TSPAN4O14817 238 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 Q56UQ5 140 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 H2BFWTQ7Z2G1 175 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 OR1P1Q8NH06 330 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 OR4A16Q8NH70 328 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 SCARB1Q8WTV0 552 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 C20orf24Q9BUV8 137 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 NSG2Q9Y328 171 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 SELENOKQ9Y6D0 94 aa9.81□□□□□ -0.84
RTN3-213ENST00000543552 C15orf62A8K5M9 175 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 K7EMT4 169 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 UBE2CO00762 179 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 NUPL2O15504 423 aaKnown RBP9.8□□□□□ -0.84
RTN3-213ENST00000543552 EIF4EP06730 217 aaKnown RBP9.8□□□□□ -0.84
RTN3-213ENST00000543552 UCP3P55916 312 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 TBC1D26Q86UD7 250 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 SNX29P2Q8IUI4 249 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 LYSMD2Q8IV50 215 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 AP3S1Q92572 193 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 C6orf62Q9GZU0 229 aaPredicted RBP9.8□□□□□ -0.84
RTN3-213ENST00000543552 TP53TG1Q9Y2A0 90 aa9.8□□□□□ -0.84
RTN3-213ENST00000543552 K7EIM0 57 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 ATG12O94817 140 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 BMI1P35226 326 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 MFAP4P55083 255 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 MZT2AQ6P582 158 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 Q6ZWC4 215 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 TXN2Q99757 166 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 FUNDC2Q9BWH2 189 aa9.79□□□□□ -0.84
RTN3-213ENST00000543552 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 KIR2DL5BA0A0G2JN68 375 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 KIR2DL5BA0A0G2JPC4 375 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
RTN3-213ENST00000543552 RORCP51449 518 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 MFAP2P55001 183 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
RTN3-213ENST00000543552 NCS1P62166 190 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 ERHP84090 104 aaKnown RBP9.78□□□□□ -0.84
RTN3-213ENST00000543552 PRCDQ00LT1 54 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 KIR2DL5AQ8N109 375 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 ZNF114Q8NC26 417 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 KIR2DL5BQ8NHK3 375 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 MISP3Q96FF7 219 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
RTN3-213ENST00000543552 SEC22AQ96IW7 307 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
RTN3-213ENST00000543552 FAM25AB3EWG3 89 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 FAM25CB3EWG5 89 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 FAM25GB3EWG6 89 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 YIF1AO95070 293 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 CD5P06127 495 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 TBPP20226 339 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 ADMP35318 185 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 VBP1P61758 197 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 RNASE10Q5GAN6 216 aaKnown RBP9.77□□□□□ -0.85
RTN3-213ENST00000543552 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 TMEM217Q8N7C4 229 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 C15orf40Q8WUR7 153 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 MRGPRFQ96AM1 343 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 GINS3Q9BRX5 216 aa9.77□□□□□ -0.85
RTN3-213ENST00000543552 DBX1A6NMT0 343 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
RTN3-213ENST00000543552 SPRY2O43597 315 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 GNG7O60262 68 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 HPGDSO60760 199 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 CTSGP08311 255 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 PGAM2P15259 253 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 ELK1P19419 428 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 AKR1C2P52895 323 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 RND3P61587 244 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 HSPE1P61604 102 aaKnown RBP9.76□□□□□ -0.85
RTN3-213ENST00000543552 ARRDC1Q8N5I2 433 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 GALNT14Q96FL9 552 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 UBQLN2Q9UHD9 624 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
RTN3-213ENST00000543552 ALMS1Q8TCU4 4167 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 CXorf65A6NEN9 183 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 I3L2K1 104 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 M0QYG6 137 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 CORTO00230 105 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 ZNF207O43670 478 aaKnown RBP9.75□□□□□ -0.85
RTN3-213ENST00000543552 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 MT-CO2P00403 227 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 CTSDP07339 412 aaPredicted RBP9.75□□□□□ -0.85
RTN3-213ENST00000543552 SNCAP37840 140 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 NPBWR1P48145 328 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 PAFAH1B2P68402 229 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 TNFRSF9Q07011 255 aa9.75□□□□□ -0.85
RTN3-213ENST00000543552 DEFB135Q30KP9 77 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms