RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CHST1	O43916	411 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	AMBP	P02760	352 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	RBMY1A1	P0DJD3	496 aa	Known RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	SERPINA2	P20848	420 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	DUSP1	P28562	367 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	PRDX2	P32119	198 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	SNU13	P55769	128 aa	Known RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	UCP3	P55916	312 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	MTCP1	P56278	107 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	RND3	P61587	244 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	RPL31	P62899	125 aa	Known RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	ARFRP1	Q13795	201 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF146	Q15072	292 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	LRRC75B	Q2VPJ9	315 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF343	Q6P1L6	599 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	KIR2DL5A	Q8N109	375 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	DYNAP	Q8N1N2	210 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	WFDC9	Q8NEX5	89 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	OR11H6	Q8NGC7	330 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	OR1P1	Q8NH06	330 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	GNPNAT1	Q96EK6	184 aa	Predicted RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	HIST1H2AA	Q96QV6	131 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	NICN1	Q9BSH3	213 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	NAA60	Q9H7X0	242 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	TNFRSF19	Q9NS68	423 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	EHF	Q9NZC4	300 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	GSKIP	Q9P0R6	139 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	LSM5	Q9Y4Y9	91 aa	Known RBP	5.13	□□□□□ -1.59
CIT-213	ENST00000543324	WSB1	Q9Y6I7	421 aa		5.13	□□□□□ -1.59
CIT-213	ENST00000543324	DUXB	A0A1W2PPF3	345 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF727	A8MUV8	499 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324		H3BUX3	64 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ST8SIA3	O43173	380 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	NXPH2	O95156	264 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	CDS2	O95674	445 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	MB	P02144	154 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	CCL3L1	P16619	93 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF20	P17024	532 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ATP6V0C	P27449	155 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	KIR2DS4	P43632	304 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	GABRA2	P47869	451 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	DYNLT3	P51808	116 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ERVFC1-1	P60608	527 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.12	□□□□□ -1.59
CIT-213	ENST00000543324	IQCJ	Q1A5X6	159 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	GFI1B	Q5VTD9	330 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	FAM90A2P	Q658T7	463 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	GLIPR1L1	Q6UWM5	242 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	C5orf24	Q7Z6I8	188 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	COMMD2	Q86X83	199 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	FAM185A	Q8N0U4	392 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	OR4D5	Q8NGN0	318 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	FAM213B	Q8TBF2	198 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	PP6455	Q8WZ26	134 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ADAT3	Q96EY9	351 aa	Predicted RBP	5.12	□□□□□ -1.59
CIT-213	ENST00000543324	BSCL2	Q96G97	398 aa	Predicted RBP	5.12	□□□□□ -1.59
CIT-213	ENST00000543324	ARHGAP5-AS1	Q96IT6	56 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	NKX3-1	Q99801	234 aa	Predicted RBP	5.12	□□□□□ -1.59
CIT-213	ENST00000543324	RARRES2	Q99969	163 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	AGMAT	Q9BSE5	352 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	PECR	Q9BY49	303 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	SMIM3	Q9BZL3	60 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	SDF2L1	Q9HCN8	221 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	PRR13	Q9NZ81	148 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	IL36RN	Q9UBH0	155 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	AK3	Q9UIJ7	227 aa		5.12	□□□□□ -1.59
CIT-213	ENST00000543324	MUC2	Q02817	5179 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	APOB	P04114	4563 aa	Known RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	IGKV1-12	A0A0C4DH73	117 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324		A0A1W2PRD5	423 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324		A0A1W2PRF3	423 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324		A0A1W2PRM7	423 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	FAM90A22P	A8MWA6	464 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	GEMIN2	O14893	280 aa	Known RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	PSPN	O60542	156 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	IGKV1D-12	P01611	117 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	ZNF728	P0DKX0	622 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	IGHV1-8	P0DP01	117 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	PI3	P19957	117 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	CD33	P20138	364 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	DTYMK	P23919	212 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	UCP1	P25874	307 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	OR3A1	P47881	315 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	FHIT	P49789	147 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	FUT6	P51993	359 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SRPX	P78539	464 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	PAX5	Q02548	391 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	MEF2C	Q06413	473 aa	Predicted RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	BAX	Q07812	192 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	USF2	Q15853	346 aa	Predicted RBP	5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SPIN3	Q5JUX0	258 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	C1orf194	Q5T5A4	169 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	SLC35E4	Q6ICL7	350 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	LHFPL4	Q7Z7J7	247 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	RTN4RL2	Q86UN3	420 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	FOXRED2	Q8IWF2	684 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324		Q8IYB0	196 aa		5.11	□□□□□ -1.59
CIT-213	ENST00000543324	H1FOO	Q8IZA3	346 aa	Predicted RBP	5.11	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms