RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 PLAUP00749 431 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 CECR9P0C854 216 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 HOXC12P31275 282 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 SRSF7Q16629 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 PINX1Q96BK5 328 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 VPS25Q9BRG1 176 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 PKIBQ9C010 78 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 TRAV1-1A0A0B4J248 108 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 LINC00310P59036 64 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 ST6GALNAC6Q969X2 333 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 GNG12Q9UBI6 72 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 THBDP07204 575 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 RPL15P61313 204 aaKnown RBP11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 ZNF90Q03938 601 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 SRSF1Q07955 248 aaKnown RBP eCLIP11.84□□□□□ -0.515e-8■■■□□ 18.4
SFSWAP-210ENST00000541286 CATR1Q13166 79 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 LINC00596Q86U02 117 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 P2RX4Q99571 388 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 APCP25054 2843 aa11.84□□□□□ -0.51
SFSWAP-210ENST00000541286 RNF212BA8MTL3 300 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 FCGR3BO75015 233 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 TCL1AP56279 114 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 TPPP2P59282 170 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 PSMG3Q9BT73 122 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 SFXN3Q9BWM7 321 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 PXMP4Q9Y6I8 212 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 FCN1O00602 326 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 COX5AP20674 150 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 MOB1BQ7L9L4 216 aa11.83□□□□□ -0.52
SFSWAP-210ENST00000541286 IGHV1-18A0A0C4DH31 117 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 LRRC30A6NM36 301 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 SLC25A6P12236 298 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 AARDQ4LEZ3 155 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 ALKBH7Q9BT30 221 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 GNB1P62873 340 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 HLA-DRB5Q30154 266 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 Q6ZR03 302 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 ZNF645Q8N7E2 425 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 OR13A1Q8NGR1 328 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 C5orf30Q96GV9 206 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 TMEM147Q9BVK8 224 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 HEYLQ9NQ87 328 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 LINC00473A8K010 186 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 WNT2P09544 360 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 TMEM11P17152 192 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 KITLGP21583 273 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 SIGLECL1Q8N7X8 197 aa11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 MRPL18Q9H0U6 180 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-210ENST00000541286 ARFGEF3Q5TH69 2177 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 TLN2Q9Y4G6 2542 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 IGHV3OR15-7A0A075B7D8 119 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 AMTP48728 403 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 QTRT1Q9BXR0 403 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 SLC25A15Q9Y619 301 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 ABCA1O95477 2261 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 TRBV6-6A0A0A6YYG2 114 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 CTXND1A0A1B0GTU2 59 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 PRAMEF5Q5TYX0 476 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 Q8IYB0 196 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 OR4C5Q8NGB2 326 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 SSMEM1Q8WWF3 244 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 NPCDR1Q9BY65 106 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 YPEL1O60688 119 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 VAMP3Q15836 100 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 TMEM14EPQ6UXP3 125 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 ANAPC16Q96DE5 110 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 YPEL2Q96QA6 119 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 ELOVL5Q9NYP7 299 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
SFSWAP-210ENST00000541286 NAV2Q8IVL1 2488 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 CDC34P49427 236 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 ITLN2Q8WWU7 325 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 RCHY1Q96PM5 261 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 MLNRO43193 412 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 TEX43Q6ZNM6 134 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 COQ2Q96H96 371 aa11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 PARD6GQ9BYG4 376 aaPredicted RBP11.8□□□□□ -0.52
SFSWAP-210ENST00000541286 SETXQ7Z333 2677 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-210ENST00000541286 M0R1X1 148 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms