RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 FAM96BQ9Y3D0 163 aa10□□□□□ -0.81
SMAD3-204ENST00000540846 IGHV3-72A0A0B4J1Y9 119 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 TRAV1-1A0A0B4J248 108 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 AGPAT2O15120 278 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 SLC25A17O43808 307 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 CD5LO43866 347 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 CEACAM3P40198 252 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 AKR1C1Q04828 323 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 LHFPL4Q7Z7J7 247 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 TEX45Q8NA69 505 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 HINT2Q9BX68 163 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 NPCDR1Q9BY65 106 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 TMEM231Q9H6L2 316 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 ZNF430Q9H8G1 570 aaPredicted RBP9.99□□□□□ -0.81
SMAD3-204ENST00000540846 RPRMQ9NS64 109 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
SMAD3-204ENST00000540846 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1B0GW64 132 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 FNDC10F2Z333 226 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 MPDU1O75352 247 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 CA2P00918 260 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 IGHV1-69P01742 117 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 IFNA4P05014 189 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 CRYGBP07316 175 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 ADCYAP1P18509 176 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 CD1BP29016 333 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 SAA4P35542 130 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 HABP2Q14520 560 aaPredicted RBP9.98□□□□□ -0.81
SMAD3-204ENST00000540846 MRGPRG-AS1Q2M3A8 158 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 C10orf91Q5T1B1 145 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 MOB3BQ86TA1 216 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 DYNAPQ8N1N2 210 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 C17orf50Q8WW18 174 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 RITA1Q96K30 269 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 RNF5Q99942 180 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 VSIRQ9H7M9 311 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 TREM1Q9NP99 234 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 TPSG1Q9NRR2 321 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 MAST4O15021 2626 aa9.98□□□□□ -0.81
SMAD3-204ENST00000540846 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1W2PN81 502 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 CGB1A6NKQ9 187 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 C17orf112F2Z3M2 114 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 NPFFO15130 113 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 HBE1P02100 147 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 OPN1MWP04001 364 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 OPN1MW2P0DN77 364 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 OPN1MW3P0DN78 364 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 CHRNA7P36544 502 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 PSG5Q15238 335 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 GUK1Q16774 197 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 C2orf83Q53S99 150 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 RUSC1-AS1Q66K80 236 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 RCC1LQ96I51 464 aaKnown RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 SMR3AQ99954 134 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 KIAA1456Q9P272 454 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 CARHSP1Q9Y2V2 147 aaKnown RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 NAV3Q8IVL0 2385 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 IGHV3OR16-10A0A075B7F0 116 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 TIMM23O14925 209 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 SOX15O60248 233 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MBP02144 154 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 RNASE2P10153 161 aaKnown RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MAS1LP35410 378 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 ELLP55199 621 aaPredicted RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 ZNF726P1Q15940 193 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 PRSS8Q16651 343 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 C10orf55Q5SWW7 151 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MINOS1Q5TGZ0 78 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 ACSM6Q6P461 480 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MMD2Q8IY49 270 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 ZNF709Q8N972 641 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 OR10W1Q8NGF6 305 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MBD3L1Q8WWY6 194 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 CFHR4Q92496 578 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 PBDC1Q9BVG4 233 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 SEC11CQ9BY50 192 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 TBL2Q9Y4P3 447 aaKnown RBP9.97□□□□□ -0.81
SMAD3-204ENST00000540846 MINOS1-NBL1R4GNA1 71 aa9.97□□□□□ -0.81
SMAD3-204ENST00000540846 OOSP1A8MZH6 123 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 C9JQL5 133 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 VENTXO95231 258 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 APOC3P02656 99 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 PAX6P26367 422 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 RAB2AP61019 212 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 CCL20P78556 96 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 PEA15Q15121 130 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 ARSJQ5FYB0 599 aaPredicted RBP9.96□□□□□ -0.82
SMAD3-204ENST00000540846 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 BRD3OSQ6XYD6 125 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 SFT2D1Q8WV19 159 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 SIGLEC9Q9Y336 463 aa9.96□□□□□ -0.82
SMAD3-204ENST00000540846 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms