RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 TMEM272A0A1B0GTI8 110 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 OR2T8A6NH00 312 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 FAM25AB3EWG3 89 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 FAM25CB3EWG5 89 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 FAM25GB3EWG6 89 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 MFNGO00587 321 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 APOA1P02647 267 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 TALDO1P37837 337 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 OR2B8PP59922 312 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 EIF4EBP1Q13541 118 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 UBE2NLQ5JXB2 153 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 SPSB3Q6PJ21 355 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 TCTEX1D2Q8WW35 142 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 BSCL2Q96G97 398 aaPredicted RBP8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 DIRAS2Q96HU8 199 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 RNF2Q99496 336 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 BET1LQ9NYM9 111 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 SMPXQ9UHP9 88 aa8.47□□□□□ -1.05
CLSTN3-209ENST00000539982 PKD1P98161 4303 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 IGLC7A0M8Q6 106 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 C15orf62A8K5M9 175 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 CYB5BO43169 146 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF207O43670 478 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 CA1P00915 261 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 EIF4EP06730 217 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 CTXN2P0C2S0 81 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 HIST1H1DP16402 221 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 ELK1P19419 428 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 NFYAP23511 347 aaPredicted RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 CNIH2Q6PI25 160 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 SLC25A38Q96DW6 304 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 ATP6V0BQ99437 205 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 AIFM2Q9BRQ8 373 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 EXTL2Q9UBQ6 330 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 V9GYH0 126 aa8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 DYNC1H1Q14204 4646 aaKnown RBP8.46□□□□□ -1.06
CLSTN3-209ENST00000539982 DNAH11Q96DT5 4516 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 IGHV3OR16-8A0A075B7F1 116 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 IGKV1D-13A0A0B4J2D9 117 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 FABP12A6NFH5 140 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 C15orf61A6NNL5 157 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 CHEK1O14757 476 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 IGKV1-13P0DP09 117 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 RAB6AP20340 208 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 TFPI2P48307 235 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 PPP5CP53041 499 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF66Q6ZN08 573 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 Q8NAQ8 132 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 SOSTQ9BQB4 213 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 CHRDL1Q9BU40 450 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 RNF126Q9BV68 326 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 RHPN1-AS1Q9BWJ2 59 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 COMMD5Q9GZQ3 224 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 HRASLSQ9HDD0 168 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 RHBDL2Q9NX52 303 aa8.45□□□□□ -1.06
CLSTN3-209ENST00000539982 IGHV7-4-1A0A0J9YVY3 117 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 M0R2N4 97 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 P0DMU3 169 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 DTYMKP23919 212 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 LGALS9BQ3B8N2 356 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 SLC25A24Q6NUK1 477 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 Q6ZTC4 211 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 GDPD1Q8N9F7 314 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 TMEM116Q8NCL8 245 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 S100A16Q96FQ6 103 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 C21orf62Q9NYP8 219 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 TAS2R8Q9NYW2 309 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 PLA2G2EQ9NZK7 142 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 RABL2AQ9UBK7 228 aaPredicted RBP8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 RABL2BQ9UNT1 228 aa8.44□□□□□ -1.06
CLSTN3-209ENST00000539982 IGKV3-7A0A075B6H7 116 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 METTL21EPA6NDL7 271 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 UPK2O00526 184 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 SERPINE2P07093 398 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 PAFAH1B2P68402 229 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 IL18Q14116 193 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 ARL6IP1Q15041 203 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 ZNF79Q15937 498 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 FAM90A2PQ658T7 463 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 GBGT1Q8N5D6 347 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 OR10W1Q8NGF6 305 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 SCARB1Q8WTV0 552 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 GPHA2Q96T91 129 aa8.43□□□□□ -1.06
CLSTN3-209ENST00000539982 CCDC32Q9BV29 185 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms