RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 ANXA3P12429 323 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 ZP3P21754 424 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 PRCDQ00LT1 54 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
PRPF19-204ENST00000539960 SLC25A24Q6NUK1 477 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 LGI3Q8N145 548 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 CENPSQ8N2Z9 138 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 GPR61Q9BZJ8 451 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 THYN1Q9P016 225 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 DMRT1Q9Y5R6 373 aa10.33□□□□□ -0.76
PRPF19-204ENST00000539960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
PRPF19-204ENST00000539960 OVOL1O14753 267 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 IFNA17P01571 189 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 HOXD3P31249 432 aaPredicted RBP10.32□□□□□ -0.76
PRPF19-204ENST00000539960 BTCP35070 178 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 SRPXP78539 464 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 ERHP84090 104 aaKnown RBP10.32□□□□□ -0.76
PRPF19-204ENST00000539960 KLF5Q13887 457 aaPredicted RBP10.32□□□□□ -0.76
PRPF19-204ENST00000539960 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 FAM209BQ5JX69 171 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 OR2C3Q8N628 320 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 SLC35G3Q8N808 338 aa10.32□□□□□ -0.76
PRPF19-204ENST00000539960 F11RQ9Y624 299 aaKnown RBP10.32□□□□□ -0.76
PRPF19-204ENST00000539960 A0A0B4J2A0 478 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 PIGBOS1A0A0B4J2F0 54 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 SEC14L6B5MCN3 397 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 LYRM1O43325 122 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 WIPF1O43516 503 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 SFT2D2O95562 160 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 VAMP1P23763 118 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 MFAP2P55001 183 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 UBE2MP61081 183 aaKnown RBP10.31□□□□□ -0.76
PRPF19-204ENST00000539960 PPP1R1AQ13522 171 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 ZNF846Q147U1 533 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 C9orf66Q5T8R8 295 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 OR1L6Q8NGR2 347 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 OR1P1Q8NH06 330 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 EEF1AKMT3Q96AZ1 226 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 CXorf58Q96LI9 332 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 PDCD10Q9BUL8 212 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 PLEKHA3Q9HB20 300 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 CACNG5Q9UF02 275 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 SHPKQ9UHJ6 478 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 FLVCR2Q9UPI3 526 aa10.31□□□□□ -0.76
PRPF19-204ENST00000539960 TRBV7-1A0A0A6YYK4 115 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 MFSD2BA6NFX1 497 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 INS-IGF2F8WCM5 200 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 BMPR1BO00238 502 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 IGHV3-23P01764 117 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 SPCS3P61009 180 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 EGFEM1PQ0D2K5 195 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 TATDN3Q17R31 274 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 SPINK9Q5DT21 86 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 CLEC19AQ6UXS0 136 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 LRTM2Q8N967 370 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 OR52E5Q8NH55 327 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 VN1R17PQ8TDU5 208 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 CCDC140Q96MF4 163 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 WDR12Q9GZL7 423 aaKnown RBP10.3□□□□□ -0.76
PRPF19-204ENST00000539960 CACFD1Q9UGQ2 172 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 S4R3C0 116 aa10.3□□□□□ -0.76
PRPF19-204ENST00000539960 CLEC3BP05452 202 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 SULT1A3P0DMM9 295 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 SULT1A4P0DMN0 295 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 SNCAP37840 140 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 INSL3P51460 131 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
PRPF19-204ENST00000539960 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 ACSM6Q6P461 480 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 ZNF114Q8NC26 417 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
PRPF19-204ENST00000539960 A0A1B0GU03 582 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 DUXBA0A1W2PPF3 345 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 PPP5D1E7EU14 171 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 GGCTO75223 188 aaKnown RBP10.28□□□□□ -0.76
PRPF19-204ENST00000539960 OR2C1O95371 312 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 SYNJ2BPP57105 145 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 KRTAP10-11P60412 298 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 SMCO1Q147U7 214 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 SCARB1Q8WTV0 552 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 ELOVL1Q9BW60 279 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 ENY2Q9NPA8 101 aa10.28□□□□□ -0.76
PRPF19-204ENST00000539960 ZMAT5Q9UDW3 170 aaKnown RBP10.28□□□□□ -0.76
PRPF19-204ENST00000539960 K7EIM0 57 aa10.27□□□□□ -0.77
PRPF19-204ENST00000539960 UPK1BO75841 260 aa10.27□□□□□ -0.77
PRPF19-204ENST00000539960 HLA-AP01891 365 aaKnown RBP10.27□□□□□ -0.77
PRPF19-204ENST00000539960 PRB2P02812 416 aaPredicted RBP10.27□□□□□ -0.77
PRPF19-204ENST00000539960 TCRBP04435 133 aa10.27□□□□□ -0.77
PRPF19-204ENST00000539960 OR4E1P0C645 316 aa10.27□□□□□ -0.77
PRPF19-204ENST00000539960 ANXA7P20073 488 aaKnown RBP10.27□□□□□ -0.77
PRPF19-204ENST00000539960 ARL3P36405 182 aa10.27□□□□□ -0.77
PRPF19-204ENST00000539960 HOXA1P49639 335 aaPredicted RBP10.27□□□□□ -0.77
PRPF19-204ENST00000539960 SUB1P53999 127 aaKnown RBP eCLIP10.27□□□□□ -0.77
PRPF19-204ENST00000539960 ASAH1Q13510 395 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms