RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 VPREB3Q9UKI3 123 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 NAV3Q8IVL0 2385 aa12.8□□□□□ -0.36
TRAF3-204ENST00000539721 AMY1AP04745 511 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 REG1AP05451 166 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 AREGP15514 252 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 RAB11AP62491 216 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 NDPQ00604 133 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 SCGB2A2Q13296 93 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 OR8G2PQ6IF36 304 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 SRSF8Q9BRL6 282 aaKnown RBP12.79□□□□□ -0.36
TRAF3-204ENST00000539721 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
TRAF3-204ENST00000539721 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 C9orf152Q5JTZ5 239 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 RBMS3Q6XE24 437 aaKnown RBP12.79□□□□□ -0.36
TRAF3-204ENST00000539721 HAPLN4Q86UW8 402 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 OR1S2Q8NGQ3 325 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 OR5C1Q8NGR4 320 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 PARP11Q9NR21 331 aa12.79□□□□□ -0.36
TRAF3-204ENST00000539721 TAAR5O14804 337 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 SCAF4O95104 1147 aaKnown RBP12.78□□□□□ -0.36
TRAF3-204ENST00000539721 IFNA4P05014 189 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAF3-204ENST00000539721 HBG1P69891 147 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 HBG2P69892 147 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 ARL16Q0P5N6 197 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 CLINT1Q14677 625 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 C2orf83Q53S99 150 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 ETV3LQ6ZN32 361 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 TMEM170AQ8WVE7 144 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 ZNF471Q9BX82 626 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-204ENST00000539721 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
TRAF3-204ENST00000539721 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
TRAF3-204ENST00000539721 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 SRD5A1P18405 259 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 ATP5IP56385 69 aaPredicted RBP12.77□□□□□ -0.36
TRAF3-204ENST00000539721 SLC38A11Q08AI6 406 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 Q71RC1 249 aaPredicted RBP12.77□□□□□ -0.36
TRAF3-204ENST00000539721 LILRB2Q8N423 598 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 P2RX4Q99571 388 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 FBXO7Q9Y3I1 522 aa12.77□□□□□ -0.36
TRAF3-204ENST00000539721 CYSRT1A8MQ03 144 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 ATP6V0E1O15342 81 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 STPG2Q8N412 459 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-204ENST00000539721 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 EGR2P11161 476 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-204ENST00000539721 SLC51BQ86UW2 128 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 TMEM86BQ8N661 226 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 LFNGQ8NES3 379 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
TRAF3-204ENST00000539721 CYTL1Q9NRR1 136 aa12.76□□□□□ -0.37
TRAF3-204ENST00000539721 MXRA5Q9NR99 2828 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 LINC01548A6NM66 108 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 BLCAPP62952 87 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 ASPHD1Q5U4P2 390 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 RPL7L1Q6DKI1 246 aaKnown RBP12.75□□□□□ -0.37
TRAF3-204ENST00000539721 C19orf35Q6ZS72 473 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 DUX5Q96PT3 197 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 ATP5SQ99766 215 aa12.75□□□□□ -0.37
TRAF3-204ENST00000539721 F11RQ9Y624 299 aaKnown RBP12.75□□□□□ -0.37
TRAF3-204ENST00000539721 ANK3Q12955 4377 aaKnown RBP12.75□□□□□ -0.37
TRAF3-204ENST00000539721 BORCS7-ASMTA0A0B4J1R7 106 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 DFFBO76075 338 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 CTRB1P17538 263 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 ATP6V1FQ16864 119 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 ECSCRQ19T08 205 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 SLC35E3Q7Z769 313 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 SETXQ7Z333 2677 aaKnown RBP12.74□□□□□ -0.37
TRAF3-204ENST00000539721 NPIPB5A8MRT5 1133 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 INAFM1C9JVW0 142 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 PRSS46E5RG02 174 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 IGHG2P01859 326 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 DEFA4P12838 97 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
TRAF3-204ENST00000539721 ZNF266Q14584 549 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 OR1P1Q8NH06 330 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 GON7Q9BXV9 100 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 WNT10AQ9GZT5 417 aa12.74□□□□□ -0.37
TRAF3-204ENST00000539721 HIVEP2P31629 2446 aa12.73□□□□□ -0.37
TRAF3-204ENST00000539721 DNAJC9-AS1A6NH13 148 aa12.73□□□□□ -0.37
TRAF3-204ENST00000539721 JTBO76095 146 aa12.73□□□□□ -0.37
TRAF3-204ENST00000539721 TTC9CQ8N5M4 171 aa12.73□□□□□ -0.37
TRAF3-204ENST00000539721 TMEM147Q9BVK8 224 aa12.73□□□□□ -0.37
TRAF3-204ENST00000539721 FBXO24O75426 580 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 CRYGCP07315 174 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 TPT1P13693 172 aaKnown RBP12.72□□□□□ -0.37
TRAF3-204ENST00000539721 MFAP2P55001 183 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 EIF5AP63241 154 aaKnown RBP12.72□□□□□ -0.37
TRAF3-204ENST00000539721 DLK1P80370 383 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 SLC25A24Q6NUK1 477 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 OR5T1Q8NG75 326 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 STOML3Q8TAV4 291 aa12.72□□□□□ -0.37
TRAF3-204ENST00000539721 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
TRAF3-204ENST00000539721 ST8SIA2Q92186 375 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms