RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 PMCHL2Q9BQD1 86 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 MRPL13Q9BYD1 178 aaKnown RBP14.1□□□□□ -0.15
SCARB1-205ENST00000538291 ATAD5Q96QE3 1844 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 ZNF506Q5JVG8 444 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 TMEM167AQ8TBQ9 72 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 BEX4Q9NWD9 120 aaPredicted RBP14.1□□□□□ -0.15
SCARB1-205ENST00000538291 SNRNP200O75643 2136 aaKnown RBP14.1□□□□□ -0.15
SCARB1-205ENST00000538291 YPEL1O60688 119 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 DSCR9P59020 149 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 CACNG7P62955 275 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 CFAP161Q6P656 301 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 LINC00114Q6XXX2 140 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 YPEL2Q96QA6 119 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 A0A1B0GUT8 65 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 FOXA3P55318 350 aaPredicted RBP14.1□□□□□ -0.15
SCARB1-205ENST00000538291 PLP1P60201 277 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 TFF3Q07654 80 aa14.1□□□□□ -0.15
SCARB1-205ENST00000538291 COL4A1P02462 1669 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 SAA2-SAA4A0A096LPE2 208 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TCF21O43680 179 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 CD8AP01732 235 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 SAA2P0DJI9 122 aaPredicted RBP14.09□□□□□ -0.15
SCARB1-205ENST00000538291 ATP5LO75964 103 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TBR1Q16650 682 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 INTS1Q8N201 2190 aaKnown RBP14.09□□□□□ -0.15
SCARB1-205ENST00000538291 GRIFINA4D1Z8 144 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 UPK2O00526 184 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 Q6AWC8 147 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TMEM183AQ8IXX5 376 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 PLPPR1Q8TBJ4 325 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 KCNS1Q96KK3 526 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 SCGB3A1Q96QR1 104 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TOMM7Q9P0U1 55 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 ZNFX1Q9P2E3 1918 aaKnown RBP14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TCRBV4S1A1TA0A5B7 111 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 DUSP14O95147 198 aaKnown RBP14.09□□□□□ -0.15
SCARB1-205ENST00000538291 CD59P13987 128 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 SLC50A1Q9BRV3 221 aa14.09□□□□□ -0.15
SCARB1-205ENST00000538291 TDGF1P13385 188 aa14.08□□□□□ -0.15
SCARB1-205ENST00000538291 LEMD1Q68G75 181 aa14.08□□□□□ -0.15
SCARB1-205ENST00000538291 LRTM2Q8N967 370 aa14.08□□□□□ -0.15
SCARB1-205ENST00000538291 ARFGEF1Q9Y6D6 1849 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 A0A1B0GTI1 187 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 CFHR1Q03591 330 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 DEPPQ9NTK1 212 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 CACNA1IQ9P0X4 2223 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 LEPP41159 167 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 A0A1B0GW15 77 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 PVRIGQ6DKI7 326 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 C18orf15Q96N68 181 aa14.08□□□□□ -0.16
SCARB1-205ENST00000538291 FER1L6-AS1Q8NA97 138 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 Q9H3A6 140 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 TRAV8-6A0A0B4J262 113 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 SIGLEC5O15389 551 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 CBLN1P23435 193 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 SOX21Q9Y651 276 aaPredicted RBP14.07□□□□□ -0.16
SCARB1-205ENST00000538291 WDR90Q96KV7 1748 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 HOXA5P20719 270 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 FAM131CQ96AQ9 280 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 AICDAQ9GZX7 198 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 RPP21Q9H633 154 aaKnown RBP14.07□□□□□ -0.16
SCARB1-205ENST00000538291 IGLV3-32A0A0A0MS00 114 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 LYNX1G3V0Z9 82 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 LYNX1P0DP58 116 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 CACNA1EQ15878 2313 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 TRBV6-7A0A0A0MS04 114 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 TMEM144Q7Z5S9 345 aa14.07□□□□□ -0.16
SCARB1-205ENST00000538291 IGHV1-18A0A0C4DH31 117 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 SOD3P08294 240 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 WNT2P09544 360 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 RHOGP84095 191 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 ZNF600Q6ZNG1 722 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 ZCCHC24Q8N2G6 241 aaKnown RBP14.06□□□□□ -0.16
SCARB1-205ENST00000538291 SPRR3Q9UBC9 169 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 ZNF98A6NK75 572 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 NTN3O00634 580 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-205ENST00000538291 IL36BQ9NZH7 164 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 CEP250Q9BV73 2442 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 TRAV14DV4A0A0A6YYC5 116 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 MUC21A0A0G2JKD1 596 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 MUC21A0A140T8X8 626 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 MUC21Q5SSG8 566 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 PRB3Q04118 309 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-205ENST00000538291 FAM71F2Q6NXP2 309 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 MIR17HGQ75NE6 70 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 OTORQ9NRC9 128 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 SCN10AQ9Y5Y9 1956 aa14.06□□□□□ -0.16
SCARB1-205ENST00000538291 TRAV40A0A0B4J280 105 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 ASCL2Q99929 193 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 GTSCR1Q86UQ5 136 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 APOHP02749 345 aaPredicted RBP14.05□□□□□ -0.16
SCARB1-205ENST00000538291 CD7P09564 240 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 LINC00271P0C7V0 271 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 CNTFRP26992 372 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 GATA2P23769 480 aaPredicted RBP14.05□□□□□ -0.16
SCARB1-205ENST00000538291 MORN2Q502X0 79 aa14.05□□□□□ -0.16
SCARB1-205ENST00000538291 CD24P25063 80 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 RNF125Q96EQ8 232 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 SCO2A0A1W2PP80 73 aa14.04□□□□□ -0.16
SCARB1-205ENST00000538291 FABP5P3A8MUU1 101 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms