RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 E7EQL1 145 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 UBE2CO00762 179 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 WNT2P09544 360 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 RBPJQ06330 500 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 TCTEX1D1Q8N7M0 179 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 MANBALQ9NQG1 85 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 SIRT7Q9NRC8 400 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 TEX50A0A1B0GTY4 177 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 E7EUB6 86 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 LY86O95711 162 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 C1QL4Q86Z23 238 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 C1orf174Q8IYL3 243 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 RNASE6Q93091 150 aaKnown RBP7.11□□□□□ -1.27
UBE3B-208ENST00000538070 RITA1Q96K30 269 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 P2RX4Q99571 388 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 METTL1Q9UBP6 276 aaKnown RBP7.11□□□□□ -1.27
UBE3B-208ENST00000538070 A0A1B0GUS0 222 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 XKRY2A2RUG3 117 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 CD3EP07766 207 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 ORM2P19652 201 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 CASP6P55212 293 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 SUMO1P63165 101 aaKnown RBP7.11□□□□□ -1.27
UBE3B-208ENST00000538070 EFNB3Q15768 340 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 CYP2G1PQ6ZSU1 146 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 TGIF2LXQ8IUE1 241 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 OR2T10Q8NGZ9 312 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 ONECUT1Q9UBC0 465 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 YTHDF2Q9Y5A9 579 aaKnown RBP7.11□□□□□ -1.27
UBE3B-208ENST00000538070 S4R3C0 116 aa7.11□□□□□ -1.27
UBE3B-208ENST00000538070 S100A8P05109 93 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 CRYBB3P26998 211 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 KIR2DS2P43631 304 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 RHOBP62745 196 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 NHLH1Q02575 133 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 FXYD3Q14802 87 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 TNXAQ16473 311 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 SGMS2Q8NHU3 365 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 BLNKQ8WV28 456 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 MALSU1Q96EH3 234 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 NGBQ9NPG2 151 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 BSNQ9UPA5 3926 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 A0A087WWC5 75 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 B4DEV8 164 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 MOSP00540 346 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 CNTFRP26992 372 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 SSBP2P81877 361 aaPredicted RBP7.1□□□□□ -1.27
UBE3B-208ENST00000538070 ERHP84090 104 aaKnown RBP7.1□□□□□ -1.27
UBE3B-208ENST00000538070 PRR27Q6MZM9 219 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 KIR3DL3Q8N743 410 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 OR4X1Q8NH49 305 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 NPIPB3Q92617 1050 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 NABP2Q9BQ15 211 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 GGACTQ9BVM4 153 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 GSX1Q9H4S2 264 aaPredicted RBP7.1□□□□□ -1.27
UBE3B-208ENST00000538070 CTSZQ9UBR2 303 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 PRNDQ9UKY0 176 aa7.1□□□□□ -1.27
UBE3B-208ENST00000538070 IGHV1-69-2A0A0G2JMI3 117 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 UPK2O00526 184 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 GCHFRP30047 84 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 CFHR2P36980 270 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 SSTP61278 116 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 RPL8P62917 257 aaKnown RBP7.09□□□□□ -1.27
UBE3B-208ENST00000538070 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 IMMP2LQ96T52 175 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 PFDN5Q99471 154 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 HILPDAQ9Y5L2 63 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 ACACBO00763 2458 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 CXorf1O96002 111 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 IGHV2-5P01817 119 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 ZNF90Q03938 601 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 SLC25A48Q6ZT89 311 aaKnown RBP7.09□□□□□ -1.27
UBE3B-208ENST00000538070 ADTRPQ96IZ2 230 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 SLC35E1Q96K37 410 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 GSN-AS1Q9NRJ2 163 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 GRIFINA4D1Z8 144 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 CGB3P0DN86 165 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 CGB7P0DN87 165 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 ERVFC1-1P60608 527 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 HES1Q14469 280 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 KDF1Q8NAX2 398 aaPredicted RBP7.09□□□□□ -1.27
UBE3B-208ENST00000538070 OCC1Q8TAD7 63 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 DDB2Q92466 427 aa7.09□□□□□ -1.27
UBE3B-208ENST00000538070 RAI1Q7Z5J4 1906 aaPredicted RBP7.09□□□□□ -1.27
UBE3B-208ENST00000538070 TMEM250H0YL14 139 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 MT-CO2P00403 227 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 HOXA5P20719 270 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 GATA4P43694 442 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 CDX1P47902 265 aaPredicted RBP7.08□□□□□ -1.28
UBE3B-208ENST00000538070 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 ARF6P62330 175 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 GAMTQ14353 236 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 PYY3Q5JQD4 70 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 LINC00469Q8N7U9 141 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 TRAV34A0A0B4J273 112 aa7.08□□□□□ -1.28
UBE3B-208ENST00000538070 IFITM10A6NMD0 228 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms