RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ATP5G3P48201 142 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 CD69Q07108 199 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 HLA-DRB5Q30154 266 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 C8orf46Q8TAG6 207 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 CACNG8Q8WXS5 425 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 ZNF430Q9H8G1 570 aaPredicted RBP12.67□□□□□ -0.38
MKS1-204ENST00000537529 CBLN4Q9NTU7 201 aa12.67□□□□□ -0.38
MKS1-204ENST00000537529 ARFGEF3Q5TH69 2177 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 PPIAL4CA0A0B4J2A2 164 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
MKS1-204ENST00000537529 LINC00869P0C866 280 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 PPIAL4GP0DN37 164 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 SFTPCP11686 197 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 GCHFRP30047 84 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
MKS1-204ENST00000537529 SUB1P53999 127 aaKnown RBP eCLIP12.66□□□□□ -0.38
MKS1-204ENST00000537529 GAMTQ14353 236 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 SLC16A13Q7RTY0 426 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 FAM122AQ96E09 287 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 UBE2CO00762 179 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 SLC25A17O43808 307 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 OR10J1P30954 320 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 C16orf82Q7Z2V1 217 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 MOB3BQ86TA1 216 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 BEND2Q8NDZ0 799 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 TIMD4Q96H15 378 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 FAM210BQ96KR6 192 aa12.66□□□□□ -0.38
MKS1-204ENST00000537529 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
MKS1-204ENST00000537529 METTL1Q9UBP6 276 aaKnown RBP12.66□□□□□ -0.38
MKS1-204ENST00000537529 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
MKS1-204ENST00000537529 TGOLN2O43493 480 aa12.65□□□□□ -0.38
MKS1-204ENST00000537529 CLN5O75503 358 aa12.65□□□□□ -0.38
MKS1-204ENST00000537529 GNB1P62873 340 aa12.65□□□□□ -0.38
MKS1-204ENST00000537529 SPATA31B1PQ5VZV4 182 aa12.65□□□□□ -0.38
MKS1-204ENST00000537529 MRPL41Q8IXM3 137 aaKnown RBP12.65□□□□□ -0.38
MKS1-204ENST00000537529 RNASEH2CQ8TDP1 164 aaKnown RBP12.65□□□□□ -0.38
MKS1-204ENST00000537529 C1QTNF9P0C862 333 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 NPPCP23582 126 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 C10orf55Q5SWW7 151 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 TEX45Q8NA69 505 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 SSX3Q99909 188 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 C19orf24Q9BVV8 132 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 FUT9Q9Y231 359 aa12.65□□□□□ -0.39
MKS1-204ENST00000537529 POLEQ07864 2286 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 CGB1A6NKQ9 187 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 BUB1B-PAK6H3BSN5 160 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 H7BYZ3 331 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 AP4M1O00189 453 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 IGHV2-5P01817 119 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 WT1-ASQ06250 92 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 KIAA0141Q14154 515 aaPredicted RBP12.64□□□□□ -0.39
MKS1-204ENST00000537529 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 PNKDQ8N490 385 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 OR51G1Q8NGK1 321 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 NEU4Q8WWR8 484 aaPredicted RBP12.64□□□□□ -0.39
MKS1-204ENST00000537529 ANAPC16Q96DE5 110 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 DOK5Q9P104 306 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 ROS1P08922 2347 aa12.64□□□□□ -0.39
MKS1-204ENST00000537529 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 IGKV1OR2-108A0A075B7D4 117 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 E7EUB6 86 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 LIPFP07098 398 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 COX7A1P24310 79 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 S100PP25815 95 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 C11orf71Q6IPW1 123 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 MMD2Q8IY49 270 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 OR4P4Q8NGL7 312 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 OR5B12Q96R08 314 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 TPSG1Q9NRR2 321 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 IGHV1-3A0A0C4DH29 117 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 ACTL6BO94805 426 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 NDUFB4O95168 129 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 ACY3Q96HD9 319 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 RITA1Q96K30 269 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 PRORYQ9H606 182 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 TECRQ9NZ01 308 aaKnown RBP12.63□□□□□ -0.39
MKS1-204ENST00000537529 ONECUT1Q9UBC0 465 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 ARL2-SNX15V9GYD0 113 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 DCHS1Q96JQ0 3298 aa12.63□□□□□ -0.39
MKS1-204ENST00000537529 PRSS8Q16651 343 aa12.62□□□□□ -0.39
MKS1-204ENST00000537529 MIR17HGQ75NE6 70 aa12.62□□□□□ -0.39
MKS1-204ENST00000537529 LY6G5BQ8NDX9 201 aa12.62□□□□□ -0.39
MKS1-204ENST00000537529 RPEQ96AT9 228 aa12.62□□□□□ -0.39
MKS1-204ENST00000537529 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
MKS1-204ENST00000537529 YTHDF2Q9Y5A9 579 aaKnown RBP12.62□□□□□ -0.39
MKS1-204ENST00000537529 A0A1W2PPI3 338 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 OR5G3P0C626 314 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 GALR1P47211 349 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 DLX1P56177 255 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 TAS2R45P59539 299 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 LY6DQ14210 128 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 MLANAQ16655 118 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 FOXH1O75593 365 aa12.61□□□□□ -0.39
MKS1-204ENST00000537529 S100A8P05109 93 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms