RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 KLK9Q9UKQ9 250 aa9.92□□□□□ -0.82
CLSTN3-205ENST00000535452 DMRT1Q9Y5R6 373 aa9.92□□□□□ -0.82
CLSTN3-205ENST00000535452 RYR3Q15413 4870 aa9.92□□□□□ -0.82
CLSTN3-205ENST00000535452 TRAV3A0A0B4J244 114 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 GNG7O60262 68 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 LY6G6CO95867 125 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 EDN2P20800 178 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 HLA-DMAP28067 261 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 SNCAP37840 140 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 SUB1P53999 127 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 MFAP4P55083 255 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 TAS2R20P59543 309 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 SCARB1Q8WTV0 552 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 FCAMRQ8WWV6 532 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 NARS2Q96I59 477 aaKnown RBP9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 TMEM231Q9H6L2 316 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 RNF167Q9H6Y7 350 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 ENY2Q9NPA8 101 aa9.91□□□□□ -0.82
CLSTN3-205ENST00000535452 A0A087WXM4 84 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 IGHV3-21A0A0B4J1V1 117 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 A0A1B0GW64 132 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 HRH1P35367 487 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 NPBWR1P48145 328 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 RPL11P62913 178 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 DEFB135Q30KP9 77 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 PHLDA2Q53GA4 152 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 MZT2AQ6P582 158 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 CADM3Q8N126 398 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 TMEM116Q8NCL8 245 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 OR1P1Q8NH06 330 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 SLC25A46Q96AG3 418 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 PINX1Q96BK5 328 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 TXN2Q99757 166 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 OVOL2Q9BRP0 275 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 SCPEP1Q9HB40 452 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 NDUFA4L2Q9NRX3 87 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 FAM212BQ9NTI7 297 aaPredicted RBP9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 NSG2Q9Y328 171 aa9.9□□□□□ -0.82
CLSTN3-205ENST00000535452 TRAV14DV4A0A0A6YYC5 116 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 A0A0J9YWU9 116 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 C15orf61A6NNL5 157 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 PGAM2P15259 253 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 RCVRNP35243 200 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 AKR1C2P52895 323 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 WT1-ASQ06250 92 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 LYG2Q86SG7 212 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 SLC35G3Q8N808 338 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 AP3S1Q92572 193 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 MFFQ9GZY8 342 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 COMMD3Q9UBI1 195 aa9.89□□□□□ -0.83
CLSTN3-205ENST00000535452 CGB1A6NKQ9 187 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 MPTX1A8MV57 137 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 FAM25AB3EWG3 89 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 FAM25CB3EWG5 89 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 FAM25GB3EWG6 89 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 CORTO00230 105 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 ZNF207O43670 478 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 TNFAIP8O95379 198 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 IFNA4P05014 189 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 CTSDP07339 412 aaPredicted RBP9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 TFPI2P48307 235 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 EIF2B2P49770 351 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 TNFRSF9Q07011 255 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 TBC1D26Q86UD7 250 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 WFDC3Q8IUB2 231 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 C15orf40Q8WUR7 153 aa9.88□□□□□ -0.83
CLSTN3-205ENST00000535452 TENM2Q9NT68 2774 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 A0A1W2PS18 150 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 IFNA17P01571 189 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 APOA1P02647 267 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 SNX29P2Q8IUI4 249 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 CCDC71LQ8N9Z2 235 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 RHPN1-AS1Q9BWJ2 59 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 SMPXQ9UHP9 88 aa9.87□□□□□ -0.83
CLSTN3-205ENST00000535452 IGHV3OR16-8A0A075B7F1 116 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 ST8SIA3O43173 380 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 NAT1P18440 290 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 ATF4P18848 351 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 RPS19P39019 145 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 RORCP51449 518 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 HSPE1P61604 102 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 PRCDQ00LT1 54 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 TRIM16LQ309B1 348 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 RNASE10Q5GAN6 216 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 CEMP1Q6PRD7 247 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 GATAD1Q8WUU5 269 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 RNF183Q96D59 192 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 RRNAD1Q96FB5 475 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 ZNF486Q96H40 463 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 GRAMD2BQ96HH9 432 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 FXYD6Q9H0Q3 95 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 CSTL1Q9H114 145 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 TMEM14BQ9NUH8 114 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms