RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 GNRHRP30968 328 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 FGF9P31371 208 aaPredicted RBP4.47□□□□□ -1.69
CD44-237ENST00000534082 SERPINB10P48595 397 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 OR2B8PP59922 312 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 DAD1P61803 113 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 PUSL1Q8N0Z8 303 aaKnown RBP4.47□□□□□ -1.69
CD44-237ENST00000534082 VSTM2AQ8TAG5 236 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 CHAC2Q8WUX2 184 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 CANT1Q8WVQ1 401 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 ST8SIA2Q92186 375 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 DGCR14Q96DF8 476 aaKnown RBP4.47□□□□□ -1.69
CD44-237ENST00000534082 GRAMD2BQ96HH9 432 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 OR10C1Q96KK4 312 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 ATP6V0BQ99437 205 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 RIMS4Q9H426 269 aaPredicted RBP4.47□□□□□ -1.69
CD44-237ENST00000534082 Q9N2K0 584 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 C12orf4Q9NQ89 552 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 ZNF586Q9NXT0 402 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 C21orf62Q9NYP8 219 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 AK3Q9UIJ7 227 aa4.47□□□□□ -1.69
CD44-237ENST00000534082 CHTOPQ9Y3Y2 248 aaKnown RBP4.47□□□□□ -1.69
CD44-237ENST00000534082 IGHV3OR16-12A0A075B7B8 117 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 IGHV3-66A0A0C4DH42 116 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 K7EQG2 157 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 RAB27BO00194 218 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 BET1O15155 118 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 CYB5BO43169 146 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 DNAH10OSP0CZ25 163 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 PRB4P10163 310 aaPredicted RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 HLA-GP17693 338 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 SRMP19623 302 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 S100A1P23297 94 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 HTR2CP28335 458 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 ALDH3B2P48448 385 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 NUTF2P61970 127 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 CLINT1Q14677 625 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 SPCS2Q15005 226 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 AARDQ4LEZ3 155 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 Q56UQ5 140 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 XAF1Q6GPH4 301 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 KCTD9Q7L273 389 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 LRRTM1Q86UE6 522 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 CBR4Q8N4T8 237 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 DUSP18Q8NEJ0 188 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 STXBP6Q8NFX7 210 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 GGHQ92820 318 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 CCDC124Q96CT7 223 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 LGALS12Q96DT0 336 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 TMEM70Q9BUB7 260 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 TMEM59Q9BXS4 323 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 FNDC4Q9H6D8 234 aaPredicted RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 SCPEP1Q9HB40 452 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 PLEKHJ1Q9NW61 149 aa4.46□□□□□ -1.7
CD44-237ENST00000534082 EXOGQ9Y2C4 368 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 MRPS7Q9Y2R9 242 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 RBM7Q9Y580 266 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 YTHDF2Q9Y5A9 579 aaKnown RBP4.46□□□□□ -1.7
CD44-237ENST00000534082 LOC105371267A0A1B0GV96 52 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 TRDCB7Z8K6 153 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 APOHP02749 345 aaPredicted RBP4.45□□□□□ -1.7
CD44-237ENST00000534082 CTSGP08311 255 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
CD44-237ENST00000534082 CELP19835 753 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 POLR2IP36954 125 aaKnown RBP4.45□□□□□ -1.7
CD44-237ENST00000534082 ASIPP42127 132 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 CBX5P45973 191 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 SSTP61278 116 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 IGSF11Q5DX21 431 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 RNASE12Q5GAN4 147 aaKnown RBP4.45□□□□□ -1.7
CD44-237ENST00000534082 TMEM69Q5SWH9 247 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 KDM4DQ6B0I6 523 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 CDH26Q8IXH8 852 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 GDPD1Q8N9F7 314 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 OR4A4PQ8NGN8 299 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 OR4S2Q8NH73 311 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 OR10J5Q8NHC4 309 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 CIB1Q99828 191 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 GINS3Q9BRX5 216 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 CABLES2Q9BTV7 478 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 VSIRQ9H7M9 311 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 MBD2Q9UBB5 411 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 GHRLQ9UBU3 117 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 PRELID3BQ9Y3B1 194 aa4.45□□□□□ -1.7
CD44-237ENST00000534082 MUC2Q02817 5179 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 TRBV6-7A0A0A0MS04 114 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 A0A0A6YYD4 124 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 TRBV5-5A0A0J9YX44 114 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 LOC102723971A0A1B0GUV8 181 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 AQP12BA6NM10 295 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 K7EIM0 57 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 FABP7O15540 132 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 FKBP6O75344 327 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 DCTN3O75935 186 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 P0C879 139 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 UBBP0CG47 229 aa4.44□□□□□ -1.7
CD44-237ENST00000534082 RPL30P62888 115 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms