RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	PPT1	P50897	306 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	AP2S1	P53680	142 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	ELL	P55199	621 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	PROK1	P58294	105 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	VAMP3	Q15836	100 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	POU2AF1	Q16633	256 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	OR2B11	Q5JQS5	317 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	GPR157	Q5UAW9	335 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	LYG1	Q8N1E2	194 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	KIR3DL3	Q8N743	410 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF383	Q8NA42	475 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	OR4S2	Q8NH73	311 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	OR9G1	Q8NH87	305 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	RNASE11	Q8TAA1	199 aa	Known RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	PHYHIPL	Q96FC7	376 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	HARBI1	Q96MB7	349 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	S1PR3	Q99500	378 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	CHRDL1	Q9BU40	450 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	TMEM133	Q9H2Q1	129 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	CYTL1	Q9NRR1	136 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	LYRM2	Q9NU23	88 aa	Predicted RBP	4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	PRELID3B	Q9Y3B1	194 aa		4.6	□□□□□ -1.67
CHKA-208	ENST00000533910	IGHV2-26	A0A0B4J1V2	119 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PPIAL4C	A0A0B4J2A2	164 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910		J3QR06	171 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910		M0R1W7	72 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	TOR1A	O14656	332 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	TAAR5	O14804	337 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	SSSCA1	O60232	199 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	NDUFS6	O75380	124 aa	Known RBP	4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	KRAS	P01116	189 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	IGLV1-47	P01700	117 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	IGHV2-5	P01817	119 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	CT45A6	P0DMU7	189 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	CT45A5	P0DMU8	189 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	CT45A7	P0DMV0	189 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PPIAL4G	P0DN37	164 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PAX1	P15863	534 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	SRD5A1	P18405	259 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PVALB	P20472	110 aa	Predicted RBP	4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	G6PC	P35575	357 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PAX9	P55771	341 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	LINC00205	P59089	165 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	TAS2R30	P59541	319 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	BAX	Q07812	192 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	AKAP6	Q13023	2319 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PSG3	Q16557	428 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	IZUMO4	Q1ZYL8	232 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	TET2	Q6N021	2002 aa	Predicted RBP	4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	SSX9	Q7RTT3	188 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	STPG2	Q8N412	459 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	SCARB1	Q8WTV0	552 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	RAB40C	Q96S21	281 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	CCL19	Q99731	98 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	PCGF1	Q9BSM1	259 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNF471	Q9BX82	626 aa	Predicted RBP	4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	CLEC7A	Q9BXN2	247 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	MAGT1	Q9H0U3	335 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	ZNRD1	Q9P1U0	126 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	WSB1	Q9Y6I7	421 aa		4.59	□□□□□ -1.67
CHKA-208	ENST00000533910	UTP20	O75691	2785 aa	Known RBP	4.59	□□□□□ -1.68
CHKA-208	ENST00000533910	USP9Y	O00507	2555 aa	Predicted RBP	4.59	□□□□□ -1.68
CHKA-208	ENST00000533910	LOC105371242	A0A075B767	164 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	TRAV26-1	A0A087WT03	109 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	IGSF23	A1L1A6	192 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910		H0YJW9	148 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	SYNGR2	O43760	224 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	CRYGB	P07316	175 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	NMB	P08949	121 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	OR9G9	P0C7N8	305 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	RRAS	P10301	218 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	TPT1	P13693	172 aa	Known RBP	4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	IL3RA	P26951	378 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	CDC34	P49427	236 aa	Predicted RBP	4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	PDLIM4	P50479	330 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	ERVK-16	P61578	105 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	GNB2	P62879	340 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	PAX2	Q02962	417 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	TNFRSF9	Q07011	255 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	RTL8B	Q17RB0	113 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	HLA-DRB5	Q30154	266 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	CLLU1	Q5K131	121 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	H2BFWT	Q7Z2G1	175 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	ZNF429	Q86V71	674 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	PDPN	Q86YL7	162 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	ABHD12	Q8N2K0	398 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	TMEM252	Q8N6L7	170 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	ZNF525	Q8N782	197 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910		Q8N7P7	452 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	UBAC2	Q8NBM4	344 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	OR11H6	Q8NGC7	330 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	OR10X1	Q8NGY0	326 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	OR52E5	Q8NH55	327 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	SMIM8	Q96KF7	97 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	NABP2	Q9BQ15	211 aa		4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	QTRT1	Q9BXR0	403 aa	Known RBP	4.58	□□□□□ -1.68
CHKA-208	ENST00000533910	MRPL20	Q9BYC9	149 aa	Known RBP	4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms