RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CNEP1R1Q8N9A8 125 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 FAM222BQ8WU58 562 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 IFI27L1Q96BM0 104 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SIGLEC8Q9NYZ4 499 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PGPEP1LA6NFU8 196 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 K7ESF4 209 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 RRHO14718 337 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 IGHV3-13P01766 116 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 CKS2P33552 79 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 MEOX1P50221 254 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 RIPPLY3P57055 190 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 CACNG7P62955 275 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 MRAP2Q96G30 205 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 ZNF355PQ9NSJ1 428 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 INSIG2Q9Y5U4 225 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PPIAL4EA0A075B759 164 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1-6A0A0C4DH72 117 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SCO2A0A1W2PP80 73 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PPIAL4DF5H284 164 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PPIAL4FP0DN26 164 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 HOXA4Q00056 320 aaPredicted RBP3.36□□□□□ -1.87
SOX6-217ENST00000533870 STPG1Q5TH74 334 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 Q6P435 159 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 Q6ZRM9 215 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 ATP6V0E2Q8NHE4 81 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SAP25Q8TEE9 199 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 NRTNQ99748 197 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PLA2G3Q9NZ20 509 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PPIAL4AQ9Y536 164 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1-27A0A075B6S5 117 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 A0A1W2PQM1 296 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 PRRG2O14669 202 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 ASIPP42127 132 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 DLX1P56177 255 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 AMN1Q8IY45 258 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 SMRP1Q8NCR6 262 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 OR13A1Q8NGR1 328 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 TTTY12Q9BZ98 90 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 VSIRQ9H7M9 311 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 AHCTF1Q8WYP5 2266 aa3.36□□□□□ -1.87
SOX6-217ENST00000533870 A0A0G2JMZ2 1700 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 GAGE12BA1L429 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 HSPB6O14558 160 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 FCER1GP30273 86 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 MFAP4P55083 255 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 TFF3Q07654 80 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SRSF9Q13242 221 aaKnown RBP eCLIP3.35□□□□□ -1.87
SOX6-217ENST00000533870 CD300EQ496F6 205 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 SHISA5Q8N114 240 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 KLF14Q8TD94 323 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 RELTQ969Z4 430 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 A0A0G2JLM5 398 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 A0A1W2PS18 150 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 C9orf118A6NHY6 69 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 H3BUT2 72 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 CNIH1O95406 144 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 CGAP01215 116 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 PATE4P0C8F1 98 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SCGB1C2P0DMR2 95 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 DEFA4P12838 97 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 OXLD1Q5BKU9 147 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 CITED1Q99966 193 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 MEGF9Q9H1U4 602 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 LENEPQ9Y5L5 61 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 A0A087WV48 116 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SMIM27A0A1W2PRY6 76 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SHISA8B8ZZ34 492 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 TMEM238C9JI98 176 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 H7C1H1 209 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 DPM2O94777 84 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1-39P01597 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 APOHP02749 345 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1D-39P04432 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SNRPCP09234 159 aaKnown RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 S100A4P26447 101 aaKnown RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 RTP5Q14D33 572 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 HAPLN4Q86UW8 402 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 NPIPB3Q92617 1050 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 SIPA1L1O43166 1804 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 UBR3Q6ZT12 1888 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 HIGD1CA8MV81 97 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 PRKNO60260 465 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 SS18L1O75177 396 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 PLNP26678 52 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 LCNL1Q6ZST4 164 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 ZNF502Q8TBZ5 544 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 COQ2Q96H96 371 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 KLF12Q9Y4X4 402 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 TIMM8BQ9Y5J9 83 aaPredicted RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
SOX6-217ENST00000533870 TMEM78Q5T7P6 136 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 PILRBQ9UKJ0 227 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 MYH4Q9Y623 1939 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 IGHV5-10-1A0A0J9YXX1 117 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 FABP5P3A8MUU1 101 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 C10orf142B7Z368 130 aa3.35□□□□□ -1.87
SOX6-217ENST00000533870 IGKV1D-33P01593 117 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms