RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CTF1Q16619 201 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 Q56UQ5 140 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 RNASE10Q5GAN6 216 aaKnown RBP11.6□□□□□ -0.55
CPSF1-211ENST00000533492 GPR107Q5VW38 600 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 SCARB1Q8WTV0 552 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 ZNF436Q9C0F3 470 aaPredicted RBP11.6□□□□□ -0.55
CPSF1-211ENST00000533492 HIPK2Q9H2X6 1198 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 TMEM14BQ9NUH8 114 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 EXTL2Q9UBQ6 330 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 KLK11Q9UBX7 282 aa11.6□□□□□ -0.55
CPSF1-211ENST00000533492 SMIM18P0DKX4 95 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 OR52I2Q8NH67 350 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 C15orf40Q8WUR7 153 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 TMEM190Q8WZ59 177 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 MRGPRFQ96AM1 343 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 SEC22AQ96IW7 307 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 RETNQ9HD89 108 aa11.59□□□□□ -0.55
CPSF1-211ENST00000533492 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 NDUFA4O00483 81 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 LAMTOR1Q6IAA8 161 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 OR1P1Q8NH06 330 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 MISP3Q96FF7 219 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 ZNF486Q96H40 463 aaPredicted RBP11.58□□□□□ -0.56
CPSF1-211ENST00000533492 FAM110AQ9BQ89 295 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 C5orf66Q9H5L9 145 aa11.58□□□□□ -0.56
CPSF1-211ENST00000533492 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
CPSF1-211ENST00000533492 GAR1Q9NY12 217 aaKnown RBP11.58□□□□□ -0.56
CPSF1-211ENST00000533492 K7EIM0 57 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 RGS5O15539 181 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 CD3DP04234 171 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 PI3P19957 117 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 PIGPP57054 158 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 RND3P61587 244 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 HSPE1P61604 102 aaKnown RBP11.57□□□□□ -0.56
CPSF1-211ENST00000533492 ERHP84090 104 aaKnown RBP11.57□□□□□ -0.56
CPSF1-211ENST00000533492 GPR141Q7Z602 305 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 ARRDC1Q8N5I2 433 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 OR2C3Q8N628 320 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 CHRDL1Q9BU40 450 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 MTFP1Q9UDX5 166 aa11.57□□□□□ -0.56
CPSF1-211ENST00000533492 LOC102724200A0A096LPH7 203 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-211ENST00000533492 NUPL2O15504 423 aaKnown RBP11.56□□□□□ -0.56
CPSF1-211ENST00000533492 ATG12O94817 140 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 TBPP20226 339 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 MFAP4P55083 255 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 PRCDQ00LT1 54 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 LHFPL1Q86WI0 220 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 ZFAND1Q8TCF1 268 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 ABHD1Q96SE0 405 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
CPSF1-211ENST00000533492 MRPS26Q9BYN8 205 aaKnown RBP11.56□□□□□ -0.56
CPSF1-211ENST00000533492 COPZ2Q9P299 210 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
CPSF1-211ENST00000533492 IGHV3OR16-8A0A075B7F1 116 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 K7EMT4 169 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 ZNF207O43670 478 aaKnown RBP11.55□□□□□ -0.56
CPSF1-211ENST00000533492 YIF1AO95070 293 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 ADMP35318 185 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 AKR1C2P52895 323 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 PPP5CP53041 499 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 TAS2R19P59542 299 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
CPSF1-211ENST00000533492 SCGB2B2Q4G0G5 96 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 CCDC71LQ8N9Z2 235 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 TMEM229BQ8NBD8 167 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 TERB2Q8NHR7 220 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 IL17DQ8TAD2 202 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
CPSF1-211ENST00000533492 TXN2Q99757 166 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
CPSF1-211ENST00000533492 RYR3Q15413 4870 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 C3orf85A0A1B0GTC6 90 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 C15orf62A8K5M9 175 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
CPSF1-211ENST00000533492 TSPAN4O14817 238 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 RAB3DO95716 219 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 MT-CO2P00403 227 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 CTSGP08311 255 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 SNCAP37840 140 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 IZUMO4Q1ZYL8 232 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 ZNF114Q8NC26 417 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 TP53RKQ96S44 253 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 PDCD10Q9BUL8 212 aa11.54□□□□□ -0.56
CPSF1-211ENST00000533492 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 I3L2K1 104 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 GNG7O60262 68 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 IFNA17P01571 189 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 SPINK9Q5DT21 86 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 STEAP1BQ6NZ63 245 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 SLC35G3Q8N808 338 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 OR4D10Q8NGI6 311 aa11.53□□□□□ -0.56
CPSF1-211ENST00000533492 RNASE11Q8TAA1 199 aaKnown RBP11.53□□□□□ -0.56
CPSF1-211ENST00000533492 RRNAD1Q96FB5 475 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms