RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 LINC01619G3V211 115 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 NDUFB8O95169 186 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 TCRBP04435 133 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 HSPB1P04792 205 aaKnown RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 DEFA4P12838 97 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 HIST1H1BP16401 226 aaKnown RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 MECP2P51608 486 aaKnown RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 MFAP2P55001 183 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 EXOSC2Q13868 293 aaKnown RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 C15orf32Q32M92 178 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 SPINK9Q5DT21 86 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 OR2C3Q8N628 320 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 LRTM2Q8N967 370 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 DPF1Q92782 380 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 C20orf85Q9H1P6 137 aa9.24□□□□□ -0.93
SSBP3-214ENST00000533209 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 F11RQ9Y624 299 aaKnown RBP9.24□□□□□ -0.93
SSBP3-214ENST00000533209 DUXBA0A1W2PPF3 345 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 ANKRD34BA5PLL1 514 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 G3V4G9 280 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 IFNA17P01571 189 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 TRBV12-3P01733 135 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 OR4E1P0C645 316 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 OR8U8P0C7N1 319 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 SULT1A3P0DMM9 295 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 SULT1A4P0DMN0 295 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 IGLL1P15814 213 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 SLURP1P55000 103 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 RAB25P57735 213 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 DHRS2Q13268 280 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 SAMD5Q5TGI4 173 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 MZT2BQ6NZ67 158 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
SSBP3-214ENST00000533209 RCC1LQ96I51 464 aaKnown RBP9.23□□□□□ -0.93
SSBP3-214ENST00000533209 RANGRFQ9HD47 186 aaPredicted RBP9.23□□□□□ -0.93
SSBP3-214ENST00000533209 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.22□□□□□ -0.93
SSBP3-214ENST00000533209 PIGBOS1A0A0B4J2F0 54 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 MFSD2BA6NFX1 497 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 HLA-AP01891 365 aaKnown RBP9.22□□□□□ -0.93
SSBP3-214ENST00000533209 SPCS3P61009 180 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 SMCO1Q147U7 214 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 PDLIM3Q53GG5 364 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-214ENST00000533209 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 SLC25A24Q6NUK1 477 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 ZNF114Q8NC26 417 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 OR1P1Q8NH06 330 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 DCUN1D4Q92564 292 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 DLX4Q92988 240 aaPredicted RBP9.22□□□□□ -0.93
SSBP3-214ENST00000533209 CCDC140Q96MF4 163 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 PDCD10Q9BUL8 212 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 PLEKHA3Q9HB20 300 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 NUDT15Q9NV35 164 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 PEF1Q9UBV8 284 aaKnown RBP9.22□□□□□ -0.93
SSBP3-214ENST00000533209 S4R3C0 116 aa9.22□□□□□ -0.93
SSBP3-214ENST00000533209 TRAV6A0A075B6T7 132 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 A0A1B0GU03 582 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 FAM240BA0A1B0GVZ2 78 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 BMPR1BO00238 502 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 DUS4LO95620 317 aaKnown RBP9.21□□□□□ -0.94
SSBP3-214ENST00000533209 IGHV3-23P01764 117 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 HOXD3P31249 432 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-214ENST00000533209 HOXA1P49639 335 aaPredicted RBP9.21□□□□□ -0.94
SSBP3-214ENST00000533209 ERHP84090 104 aaKnown RBP9.21□□□□□ -0.94
SSBP3-214ENST00000533209 C4orf46Q504U0 113 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 C1QL4Q86Z23 238 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 OR1L6Q8NGR2 347 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 TMED3Q9Y3Q3 217 aa9.21□□□□□ -0.94
SSBP3-214ENST00000533209 K7EIM0 57 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 OVOL1O14753 267 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 CYB5BO43169 146 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 PITX3O75364 302 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 NXPH3O95157 252 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 HOXB5P09067 269 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 RNASE2P10153 161 aaKnown RBP9.2□□□□□ -0.94
SSBP3-214ENST00000533209 ZP3P21754 424 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 TNFRSF9Q07011 255 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 KLF5Q13887 457 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-214ENST00000533209 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 FAM209BQ5JX69 171 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 KPRPQ5T749 579 aaPredicted RBP9.2□□□□□ -0.94
SSBP3-214ENST00000533209 GGNBP1Q5YKI7 109 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 ZNF502Q8TBZ5 544 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 VN1R17PQ8TDU5 208 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 CXorf58Q96LI9 332 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 MCRIP2Q9BUT9 160 aaKnown RBP9.2□□□□□ -0.94
SSBP3-214ENST00000533209 THYN1Q9P016 225 aa9.2□□□□□ -0.94
SSBP3-214ENST00000533209 TRBV7-1A0A0A6YYK4 115 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 CEBPZOSA8MTT3 80 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 PPP5D1E7EU14 171 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 ADAP1O75689 374 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 SLC25A6P12236 298 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 SNCAP37840 140 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 BSXQ3C1V8 233 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms