RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 IFNA7P01567 189 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 IFNA21P01568 189 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 RPLP1P05386 114 aaKnown RBP8.78□□□□□ -1
TRAPPC4-211ENST00000533012 CRYGCP07315 174 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 OR13C7P0DN81 318 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 DEFA4P12838 97 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 CXCL3P19876 107 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 PSMB6P28072 239 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 SMCO1Q147U7 214 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 NMSQ5H8A3 153 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 UXS1Q8NBZ7 420 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 OR10W1Q8NGF6 305 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 KLK15Q9H2R5 256 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 PLEKHA3Q9HB20 300 aa8.78□□□□□ -1
TRAPPC4-211ENST00000533012 CYB5BO43169 146 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 BRI3O95415 125 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 TRGV3P03979 118 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 PET100P0DJ07 73 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 SLC25A6P12236 298 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 AREGP15514 252 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 SPCS3P61009 180 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 ERHP84090 104 aaKnown RBP8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 PRCDQ00LT1 54 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 NSUN5P1Q3KNT7 163 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 LCNL1Q6ZST4 164 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 C9orf62Q8N4C0 152 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR52E5Q8NH55 327 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 ENY2Q9NPA8 101 aa8.77□□□□□ -1.01
TRAPPC4-211ENST00000533012 A0A0G2JLM5 398 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 A0A1W2PRX2 142 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 IGLC7A0M8Q6 106 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 L7N2F9 121 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 ADAP1O75689 374 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 REG1AP05451 166 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 CTRB1P17538 263 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 CDX1P47902 265 aaPredicted RBP8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 TPPP2P59282 170 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 RPL23AP62750 156 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 IFITM2Q01629 132 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 AARDQ4LEZ3 155 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 GGNBP1Q5YKI7 109 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 CTRB2Q6GPI1 263 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 GSG1LQ6UXU4 331 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR1S1Q8NH92 325 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 USMG5Q96IX5 58 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
TRAPPC4-211ENST00000533012 C13orf42A0A1B0GVH6 325 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 CEBPZOSA8MTT3 80 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 NUDT19A8MXV4 375 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 M0QZ24 198 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 PRH1P02810 166 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 HIST1H1BP16401 226 aaKnown RBP8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 SNCAP37840 140 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 HOXA1P49639 335 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 RAB14P61106 215 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 KIAA0141Q14154 515 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 C2orf68Q2NKX9 166 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 PDLIM3Q53GG5 364 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 ZNF491Q8N8L2 437 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 MYOZ3Q8TDC0 251 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 THYN1Q9P016 225 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 TENM1Q9UKZ4 2725 aa8.75□□□□□ -1.01
TRAPPC4-211ENST00000533012 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 A0A0D9SG52 128 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 FAM223BA6NKX1 122 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 INS-IGF2F8WCM5 200 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 PITX3O75364 302 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR2J3O76001 311 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 NXPH3O95157 252 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 NUP62P37198 522 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 SUB1P53999 127 aaKnown RBP eCLIP8.74□□□□□ -1.011e-9■■■■■ 65.6
TRAPPC4-211ENST00000533012 RHOGP84095 191 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 TNFRSF9Q07011 255 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 SLC25A24Q6NUK1 477 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 FAM223AQ8IWN6 122 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR2C3Q8N628 320 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 NECAP1Q8NC96 275 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 KLHL30-AS1Q8NEE0 82 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR4F17Q8NGA8 305 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 THAP6Q8TBB0 222 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 OR4F4Q96R69 305 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 HIPK2Q9H2X6 1198 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 HEYLQ9NQ87 328 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 FBXL7Q9UJT9 491 aa8.74□□□□□ -1.01
TRAPPC4-211ENST00000533012 C5orf51A6NDU8 294 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 MPTX1A8MV57 137 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 FAM25EA8MYX2 175 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 FAM90A26D6RGX4 464 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 SMLR1H3BR10 107 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 TSC22D2O75157 780 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 MED6O75586 246 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 S100A11P31949 105 aa8.73□□□□□ -1.01
TRAPPC4-211ENST00000533012 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms