RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 C3orf56Q8N813 242 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 WBP1Q96G27 269 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 AICDAQ9GZX7 198 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 RNF114Q9Y508 228 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 MINOS1-NBL1R4GNA1 71 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
COLCA1-203ENST00000532918 P2RY4P51582 365 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 RPS11P62280 158 aaKnown RBP eCLIP9□□□□□ -0.97
COLCA1-203ENST00000532918 CKS2P33552 79 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 FOXF2Q12947 444 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 IBA57Q5T440 356 aaKnown RBP9□□□□□ -0.97
COLCA1-203ENST00000532918 VKORC1L1Q8N0U8 176 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 NABP2Q9BQ15 211 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 MRPL16Q9NX20 251 aaKnown RBP9□□□□□ -0.97
COLCA1-203ENST00000532918 A0A0G2JK05 382 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 GATA3P23771 443 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 WDR82Q6UXN9 313 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 LINC01587Q99440 93 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 SIGLEC5O15389 551 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 RND3P61587 244 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 BMPERQ8N8U9 685 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 CACNG8Q8WXS5 425 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 MEGF9Q9H1U4 602 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 GSN-AS1Q9NRJ2 163 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
COLCA1-203ENST00000532918 FOXA2Q9Y261 457 aaPredicted RBP9□□□□□ -0.97
COLCA1-203ENST00000532918 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 CD5P06127 495 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 KIR2DL4Q99706 377 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 NUP214P35658 2090 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-203ENST00000532918 PPP1R17O96001 155 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 OTX1P32242 354 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-203ENST00000532918 LDLRAD2Q5SZI1 272 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 TEX45Q8NA69 505 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 AURKAIP1Q9NWT8 199 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-203ENST00000532918 ABCA7Q8IZY2 2146 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 IGKV1D-43A0A0B4J1Z2 117 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 PSMB11A5LHX3 300 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 PIN1P1O15428 100 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 LEPP41159 167 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 GCSAMLQ5JQS6 135 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 CYB561D1Q8N8Q1 229 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 MAP1LC3AQ9H492 121 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV3-35A0A0C4DH35 117 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 ASIPP42127 132 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 TMEM187Q14656 261 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 OR11H7Q8NGC8 314 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 SPSB4Q96A44 273 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV3-11P01762 117 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 CCL3L1P16619 93 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 LINC00305Q7Z4B0 112 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 OR13C6PQ8NH95 151 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 TMEM167AQ8TBQ9 72 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 ZNF837Q96EG3 531 aaPredicted RBP8.99□□□□□ -0.97
COLCA1-203ENST00000532918 WNT10AQ9GZT5 417 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 SLC25A15Q9Y619 301 aa8.99□□□□□ -0.97
COLCA1-203ENST00000532918 DNAJC13O75165 2243 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 IGHV3-23P01764 117 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 NEUROG1Q92886 237 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 SLC25A38Q96DW6 304 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 RBM38Q9H0Z9 239 aaKnown RBP8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TRAV8-2A0A0B4J237 113 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 MSGN1A6NI15 193 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 PLA2G10O15496 165 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TYMSP04818 313 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TNFRSF18Q9Y5U5 241 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 FOXI3A8MTJ6 420 aaPredicted RBP8.98□□□□□ -0.97
COLCA1-203ENST00000532918 LYNX1G3V0Z9 82 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 M0R1W7 72 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 LINC00271P0C7V0 271 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 LYNX1P0DP58 116 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TCF24Q7RTU0 167 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TTC9CQ8N5M4 171 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 FBLIM1Q8WUP2 373 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 PPP1R3EQ9H7J1 279 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 SBF1O95248 1867 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 TRGV2A0A075B6R0 118 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 LILRA1O75019 489 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 NPIPB7O75200 414 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 RUNX1Q01196 453 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 DTX2Q86UW9 622 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 GTF3AQ92664 365 aaKnown RBP8.98□□□□□ -0.97
COLCA1-203ENST00000532918 HIST1H2BAQ96A08 127 aa8.98□□□□□ -0.97
COLCA1-203ENST00000532918 MYOFQ9NZM1 2061 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 ZP1P60852 638 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 LURAP1LQ8IV03 231 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 OR10AG1Q8NH19 301 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 SLC50A1Q9BRV3 221 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 NMBP08949 121 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 HTN3P15516 51 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 GPX4P36969 197 aaPredicted RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 Q0VFX4 171 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 GGNQ86UU5 652 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
COLCA1-203ENST00000532918 MTCL1Q9Y4B5 1905 aaKnown RBP8.97□□□□□ -0.97
COLCA1-203ENST00000532918 NDUFB4O95168 129 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms