RNA–Protein interactions for RNA: ENST00000532751.1

PTPRK-222, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 4

Gene PTPRK, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-222ENST00000532751 F11RQ9Y624 299 aaKnown RBP16.86■□□□□ 0.29
PTPRK-222ENST00000532751 A6NHS1 94 aa16.85■□□□□ 0.29
PTPRK-222ENST00000532751 KLF5Q13887 457 aaPredicted RBP16.85■□□□□ 0.29
PTPRK-222ENST00000532751 IZUMO4Q1ZYL8 232 aa16.85■□□□□ 0.29
PTPRK-222ENST00000532751 TMEM268Q5VZI3 342 aa16.85■□□□□ 0.29
PTPRK-222ENST00000532751 SELENOHQ8IZQ5 122 aaKnown RBP16.85■□□□□ 0.29
PTPRK-222ENST00000532751 OR4C12Q96R67 309 aa16.85■□□□□ 0.29
PTPRK-222ENST00000532751 PLEKHA3Q9HB20 300 aa16.85■□□□□ 0.29
PTPRK-222ENST00000532751 TRBV7-1A0A0A6YYK4 115 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 CENPXA8MT69 81 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 ERHP84090 104 aaKnown RBP16.84■□□□□ 0.29
PTPRK-222ENST00000532751 TMEM187Q14656 261 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 TMED4Q7Z7H5 227 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 SLC35G3Q8N808 338 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 LHFPL5Q8TAF8 219 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 MRAPQ8TCY5 172 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 IL22RA2Q969J5 263 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 SDHCQ99643 169 aaPredicted RBP16.84■□□□□ 0.29
PTPRK-222ENST00000532751 TMEM56-RWDD3S4R434 201 aa16.84■□□□□ 0.29
PTPRK-222ENST00000532751 A0A0B4J293 547 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 PIGBOS1A0A0B4J2F0 54 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 BMPR1BO00238 502 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 IFNA17P01571 189 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 IGHV3-23P01764 117 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 SYNJ2BPP57105 145 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 SRPXP78539 464 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 RBMS2Q15434 407 aaKnown RBP16.83■□□□□ 0.28
PTPRK-222ENST00000532751 CLEC19AQ6UXS0 136 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 LINC00299Q6ZSB3 139 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 OR2C3Q8N628 320 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 S4R3C0 116 aa16.83■□□□□ 0.28
PTPRK-222ENST00000532751 A0A0G2JRQ6 117 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 ST8SIA3O43173 380 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 GGCTO75223 188 aaKnown RBP16.82■□□□□ 0.28
PTPRK-222ENST00000532751 ARL3P36405 182 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 CNPY1Q3B7I2 92 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 TMEM128Q5BJH2 165 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 OR9G4Q8NGQ1 327 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 OR1P1Q8NH06 330 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 VN1R17PQ8TDU5 208 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 CCDC140Q96MF4 163 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 C7orf50Q9BRJ6 194 aaKnown RBP16.82■□□□□ 0.28
PTPRK-222ENST00000532751 ENY2Q9NPA8 101 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 DMRT1Q9Y5R6 373 aa16.82■□□□□ 0.28
PTPRK-222ENST00000532751 MFSD2BA6NFX1 497 aa16.81■□□□□ 0.28
PTPRK-222ENST00000532751 PPP5D1E7EU14 171 aa16.81■□□□□ 0.28
PTPRK-222ENST00000532751 IL7P13232 177 aa16.81■□□□□ 0.28
PTPRK-222ENST00000532751 SUPT4H1P63272 117 aaKnown RBP16.81■□□□□ 0.28
PTPRK-222ENST00000532751 LGI3Q8N145 548 aa16.81■□□□□ 0.28
PTPRK-222ENST00000532751 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.81■□□□□ 0.28
PTPRK-222ENST00000532751 PEMTQ9UBM1 199 aa16.81■□□□□ 0.28
PTPRK-222ENST00000532751 LINC00854A0A1B0GVQ3 168 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 SPINK9Q5DT21 86 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 CENPSQ8N2Z9 138 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 ZNF114Q8NC26 417 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 ZNF502Q8TBZ5 544 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 GPR146Q96CH1 333 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 DNAH3Q8TD57 4116 aa16.8■□□□□ 0.28
PTPRK-222ENST00000532751 A0A0B4J2A0 478 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 CLEC3BP05452 202 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 SNCAP37840 140 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 HOXA1P49639 335 aaPredicted RBP16.79■□□□□ 0.28
PTPRK-222ENST00000532751 CCR6P51684 374 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 MFAP2P55001 183 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 Q6ZRM9 215 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 S100ZQ8WXG8 99 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 BATF3Q9NR55 127 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 PRR13Q9NZ81 148 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 CACNG5Q9UF02 275 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 CACFD1Q9UGQ2 172 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 SHPKQ9UHJ6 478 aa16.79■□□□□ 0.28
PTPRK-222ENST00000532751 WI2-2373I1.2A0A1W2PRP0 233 aa16.78■□□□□ 0.28
PTPRK-222ENST00000532751 INS-IGF2F8WCM5 200 aa16.78■□□□□ 0.28
PTPRK-222ENST00000532751 VAMP1P23763 118 aa16.78■□□□□ 0.28
PTPRK-222ENST00000532751 SPCS3P61009 180 aa16.78■□□□□ 0.28
PTPRK-222ENST00000532751 OR52E5Q8NH55 327 aa16.78■□□□□ 0.28
PTPRK-222ENST00000532751 ZNF256Q9Y2P7 627 aaPredicted RBP16.78■□□□□ 0.28
PTPRK-222ENST00000532751 K7EIL1 84 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 NDUFB6O95139 128 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 OR2C1O95371 312 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 LY86O95711 162 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 SULT1A3P0DMM9 295 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 SULT1A4P0DMN0 295 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 GPR183P32249 361 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 SUB1P53999 127 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPRK-222ENST00000532751 UBE2MP61081 183 aaKnown RBP16.77■□□□□ 0.28
PTPRK-222ENST00000532751 FAM106AQ4KMX7 169 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 AARDQ4LEZ3 155 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 GPHB5Q86YW7 130 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 MISP3Q96FF7 219 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 ATP6V0BQ99437 205 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 CCDC32Q9BV29 185 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 C21orf62Q9NYP8 219 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 PTTG2Q9NZH5 202 aa16.77■□□□□ 0.28
PTPRK-222ENST00000532751 SORL1Q92673 2214 aa16.77■□□□□ 0.27
PTPRK-222ENST00000532751 DUXBA0A1W2PPF3 345 aa16.76■□□□□ 0.27
PTPRK-222ENST00000532751 HLA-AP01891 365 aaKnown RBP16.76■□□□□ 0.27
PTPRK-222ENST00000532751 DCTN2Q13561 401 aaKnown RBP16.76■□□□□ 0.27
PTPRK-222ENST00000532751 PLET1Q6UQ28 207 aa16.76■□□□□ 0.27
PTPRK-222ENST00000532751 SCARB1Q8WTV0 552 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms