RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 TRBV20OR9-2A0A075B6H5 130 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 NMBP08949 121 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 CLEC19AQ6UXS0 136 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 WBP1Q96G27 269 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 A0A0G2JK05 382 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 SUMO2P61956 95 aaKnown RBP12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 MRPL13Q9BYD1 178 aaKnown RBP12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 C20orf204Q6ZNR8 217 aa12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 MRPL18Q9H0U6 180 aaKnown RBP12.39□□□□□ -0.43
PCDHA9-202ENST00000532602 CXorf65A6NEN9 183 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 EFNA2O43921 213 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 YPEL1O60688 119 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 DANCRP0C864 163 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 YPEL2Q96QA6 119 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 NEU1Q99519 415 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 HSPB9Q9BQS6 159 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 RPRMQ9NS64 109 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 C17orf98A8MV24 154 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 LYPD3O95274 346 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 PAX1P15863 534 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 ARHGEF17Q96PE2 2063 aaPredicted RBP12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 MSGN1A6NI15 193 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 RARRES2Q99969 163 aa12.38□□□□□ -0.43
PCDHA9-202ENST00000532602 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 NPCDR1Q9BY65 106 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 ALKBH7Q9BT30 221 aaPredicted RBP12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 WNT10AQ9GZT5 417 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 TRAV24A0A0B4J272 114 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 CLPSP04118 112 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 GGNQ86UU5 652 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 PARLQ9H300 379 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 HLA-DRB1P01911 266 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 H2BFSP57053 126 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 GTF3AQ92664 365 aaKnown RBP12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 LINC01587Q99440 93 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
PCDHA9-202ENST00000532602 A0A1B0GTI1 187 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 IGHV3-11P01762 117 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 TAS2R60P59551 318 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 HBBP68871 147 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 VENTXO95231 258 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 EFNA4P52798 201 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 CENPWQ5EE01 88 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 OR52E5Q8NH55 327 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 SNRNP200O75643 2136 aaKnown RBP12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 KLK15Q9H2R5 256 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 WDR82Q6UXN9 313 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 SLC50A1Q9BRV3 221 aa12.36□□□□□ -0.43
PCDHA9-202ENST00000532602 PRR32B1ATL7 298 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 M0R381 172 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 DUSP14O95147 198 aaKnown RBP12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 PKIAP61925 76 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 FOLR2P14207 255 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 C11orf44Q8N8P7 122 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 ESPL1Q14674 2120 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 SRIP30626 198 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 Q5BKY6 102 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 SELENOKQ9Y6D0 94 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 PSMB11A5LHX3 300 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 Q6AWC8 147 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 PVRIGQ6DKI7 326 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 C17orf82Q86X59 251 aaPredicted RBP12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 MRAP2Q96G30 205 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 WNT2P09544 360 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 C12orf54Q6X4T0 127 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 PAQR4Q8N4S7 273 aaPredicted RBP12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 SFRP2Q96HF1 295 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
PCDHA9-202ENST00000532602 TRBV6-7A0A0A0MS04 114 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 SAA1P0DJI8 122 aaPredicted RBP12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 IGFBP2P18065 325 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 Q9UFV3 132 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 NCOR1O75376 2440 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 WDR81Q562E7 1941 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 UPK2O00526 184 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 MST1P26927 711 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 HIST1H4GQ99525 98 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 H7C2G1 150 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 TRGC2P03986 189 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 STHQ8IWL8 128 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 DOPEY2Q9Y3R5 2298 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 SAA2-SAA4A0A096LPE2 208 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 CD8AP01732 235 aa12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 SAA2P0DJI9 122 aaPredicted RBP12.34□□□□□ -0.43
PCDHA9-202ENST00000532602 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms