RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 LOXL3P58215 753 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 KIAA1644Q3SXP7 199 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 RABAC1Q9UI14 185 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 TRBV9A0A0B4J1U6 114 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 SELLP14151 372 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 RPL23P62829 140 aaKnown RBP12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM78Q5T7P6 136 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 RPUSD1Q9UJJ7 312 aaKnown RBP12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 ANAPC10Q9UM13 185 aa12.74□□□□□ -0.37
PCDHA3-202ENST00000532566 SRIP30626 198 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 RNASE6Q93091 150 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 METTL26Q96S19 204 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 M0QZK8 103 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 CBLN1P23435 193 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 SRSF6Q13247 344 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM116Q8NCL8 245 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM183AQ8IXX5 376 aa12.73□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L4A6NDZ8 208 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L3A6NE82 208 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L5A6NJ08 208 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 PF4V1P10720 104 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 MBD3L2Q8NHZ7 208 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 DOCK10Q96BY6 2186 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 GRIFINA4D1Z8 144 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 FOXH1O75593 365 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 HERPUD1Q15011 391 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 CD177Q8N6Q3 437 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 PGLYRP4Q96LB8 373 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 CDC42EP3Q9UKI2 254 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 RSPO1Q2MKA7 263 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 SPANXN1Q5VSR9 72 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 SPACA3Q8IXA5 215 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 OR52E5Q8NH55 327 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 MLNRO43193 412 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 EAF1Q96JC9 268 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 VKORC1Q9BQB6 163 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 LTBP2Q14767 1821 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
PCDHA3-202ENST00000532566 FOSL1P15407 271 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 PRCDQ00LT1 54 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 SRSF12Q8WXF0 261 aaKnown RBP12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 HS3ST6Q96QI5 342 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 TMEM133Q9H2Q1 129 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 IL36BQ9NZH7 164 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 USF3Q68DE3 2245 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 SLC17A3O00476 420 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 IGKV3-15P01624 115 aa12.71□□□□□ -0.37
PCDHA3-202ENST00000532566 TRAV1-1A0A0B4J248 108 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 C20orf204Q6ZNR8 217 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 COQ2Q96H96 371 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 KIAA1671Q9BY89 1806 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 TMEM14EPQ6UXP3 125 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 OR8A1Q8NGG7 326 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 TMEM208Q9BTX3 173 aa12.71□□□□□ -0.38
PCDHA3-202ENST00000532566 ATXN7O15265 892 aaPredicted RBP12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 RAB9AP51151 201 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 PSG9Q00887 426 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 Q6ZS92 163 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 PIMREGQ9BSJ6 248 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 IGHV3-35A0A0C4DH35 117 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 C1QTNF9BB2RNN3 333 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 PEX7O00628 323 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 MAS1LP35410 378 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 PDLIM4P50479 330 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 ATP5J2P56134 94 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 CD69Q07108 199 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 WFIKKN1Q96NZ8 548 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
PCDHA3-202ENST00000532566 TMEM97Q5BJF2 176 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 A0A1W2PS18 150 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 TWIST1Q15672 202 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 DMRT1Q9Y5R6 373 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 CD99P14209 185 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 RNF151Q2KHN1 245 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 OR4B1Q8NGF8 309 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 HOXA5P20719 270 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 NTF4P34130 210 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 ID1P41134 155 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 GCSAMLQ5JQS6 135 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 HEPN1Q6WQI6 88 aa12.69□□□□□ -0.38
PCDHA3-202ENST00000532566 OBSL1O75147 1896 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 CREBBPQ92793 2442 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 A0A0G2JRQ6 117 aa12.68□□□□□ -0.38
PCDHA3-202ENST00000532566 A0A1B0GW64 132 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms