RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IGFBP3P17936 291 aaPredicted RBP9.43□□□□□ -0.9
PTPRK-221ENST00000532331 CD24P25063 80 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 UCP1P25874 307 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF502Q8TBZ5 544 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 MAP1LC3AQ9H492 121 aa9.43□□□□□ -0.9
PTPRK-221ENST00000532331 OR4C46A6NHA9 309 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 C17orf98A8MV24 154 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF207O43670 478 aaKnown RBP9.42□□□□□ -0.9
PTPRK-221ENST00000532331 GCSHP23434 173 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 NEUROG1Q92886 237 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 CACNA1HO95180 2353 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 IL6RP08887 468 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-221ENST00000532331 FAM209BQ5JX69 171 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 GOLT1AQ6ZVE7 132 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 TNFRSF14Q92956 283 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 MOB4Q9Y3A3 225 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 E7EQL1 145 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 LYPD3O95274 346 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-221ENST00000532331 C2orf68Q2NKX9 166 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 SAPCD1Q5SSQ6 148 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 PLPPR1Q8TBJ4 325 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
PTPRK-221ENST00000532331 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3-49A0A0A0MS15 119 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 PSMB11A5LHX3 300 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 MSGN1A6NI15 193 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF324O75467 553 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 PUSL1Q8N0Z8 303 aaKnown RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 CLDND2Q8NHS1 167 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 CIDEAO60543 219 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 GGCTO75223 188 aaKnown RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 AGAP20933 346 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 HERPUD1Q15011 391 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 BRD3OSQ6XYD6 125 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 PAQR4Q8N4S7 273 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF318Q5VUA4 2279 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 TIMM23O14925 209 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 YPEL1O60688 119 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 NUDT3O95989 172 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 NMUP48645 174 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 CD69Q07108 199 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 FAM169BQ8N8A8 192 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 YPEL2Q96QA6 119 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 MRPL18Q9H0U6 180 aaKnown RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 FOXA2Q9Y261 457 aaPredicted RBP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 EIF3GO75821 320 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPRK-221ENST00000532331 TFF1P04155 84 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 ADIPOQQ15848 244 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 FAM159AQ6UWV7 190 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 LYZL4Q96KX0 146 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 RRHO14718 337 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 TRGC2P03986 189 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 GATA3P23771 443 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 UQCRFS1P47985 274 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 SMUG1Q53HV7 270 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 RPRMLQ8N4K4 120 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 ZNF383Q8NA42 475 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 GPR82Q96P67 336 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 NPCDR1Q9BY65 106 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 PARLQ9H300 379 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 PRO3102Q9H379 93 aa9.41□□□□□ -0.9
PTPRK-221ENST00000532331 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 IGHV3-66A0A0C4DH42 116 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 SRRM5B3KS81 715 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-221ENST00000532331 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-221ENST00000532331 COL8A2P25067 703 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 HIST1H2BAQ96A08 127 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 MUC6Q6W4X9 2439 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 FOXI3A8MTJ6 420 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-221ENST00000532331 LY6HO94772 140 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 Q5BKY6 102 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 MINOS1Q5TGZ0 78 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 NABP1Q96AH0 204 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 DPH3Q96FX2 82 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 CBY1Q9Y3M2 126 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 MINOS1-NBL1R4GNA1 71 aa9.4□□□□□ -0.9
PTPRK-221ENST00000532331 H3BUX3 64 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 MSMBP08118 114 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 TDGF1P13385 188 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 CD33P20138 364 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 CCL1P22362 96 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.91
PTPRK-221ENST00000532331 WNT10AQ9GZT5 417 aa9.4□□□□□ -0.91
PTPRK-221ENST00000532331 M0R1W7 72 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 NPFFO15130 113 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 PKIAP61925 76 aa9.39□□□□□ -0.91
PTPRK-221ENST00000532331 ICAM4Q14773 271 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms