RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 RBM7Q9Y580 266 aaKnown RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 PCDH15Q96QU1 1955 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 PRDM15P57071 1507 aaPredicted RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 MICAL3Q7RTP6 2002 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 CCDC88CQ9P219 2028 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 FLT4P35916 1363 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 GBF1Q92538 1859 aa1.33□□□□□ -2.2
CD44-234ENST00000531873 ZNF106Q9H2Y7 1883 aaKnown RBP1.33□□□□□ -2.2
CD44-234ENST00000531873 FAM208BQ5VWN6 2430 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 PIK3C2AO00443 1686 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 MIA2Q96PC5 1412 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ACACBO00763 2458 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ARHGAP35Q9NRY4 1499 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 USP24Q9UPU5 2620 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 AGLP35573 1532 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ATP7AQ04656 1500 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ASXL1Q8IXJ9 1541 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 TPRP12270 2363 aaKnown RBP1.32□□□□□ -2.2
CD44-234ENST00000531873 KIF13BQ9NQT8 1826 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 TRGV5A0A0B4J1U4 118 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 A0A1B0GV50 99 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 TMEM269A0A1B0GVZ9 245 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ATP5HO75947 161 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 TTRP02766 147 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ALDH3A1P30838 453 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 TAS2R20P59543 309 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 STX5Q13190 355 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 MIAQ16674 131 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 SPOPLQ6IQ16 392 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ZNF767PQ75MW2 155 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 SSX8Q7RTT4 187 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ZNF283Q8N7M2 679 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 Q9BRP9 147 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 PRO3102Q9H379 93 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 PAQR5Q9NXK6 330 aaPredicted RBP1.32□□□□□ -2.2
CD44-234ENST00000531873 UGGT1Q9NYU2 1555 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 REV3LO60673 3130 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 CFAP47Q6ZTR5 3102 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 MTUS2Q5JR59 1369 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 HECTD1Q9ULT8 2610 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 ERBINQ96RT1 1412 aa1.32□□□□□ -2.2
CD44-234ENST00000531873 NLRP1Q9C000 1473 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 DOCK10Q96BY6 2186 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 NCOR2Q9Y618 2525 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 DISP1Q96F81 1524 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 PEG3Q9GZU2 1588 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 DIP2CQ9Y2E4 1556 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 A0A0J9YY10 115 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 A0A1B0GX78 115 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 I3L521 148 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 FAAHO00519 579 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 TXNDC9O14530 226 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 FADS1O60427 444 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 IFNA6P05013 189 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 BPGMP07738 259 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CD79AP11912 226 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 KCNE1P15382 129 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CCR2P41597 374 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 RPL5P46777 297 aaKnown RBP1.31□□□□□ -2.2
CD44-234ENST00000531873 OR4D2P58180 307 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 RPS20P60866 119 aaKnown RBP1.31□□□□□ -2.2
CD44-234ENST00000531873 RUNX1Q01196 453 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CAV1Q03135 178 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 LPCAT3Q6P1A2 487 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 AGTRAPQ6RW13 159 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 KRTAP13-1Q8IUC0 172 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 C20orf196Q8IYI0 205 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 SLC35F6Q8N357 371 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 ROPN1LQ96C74 230 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CHMP6Q96FZ7 201 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 DNAJC30Q96LL9 226 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 FAM96AQ9H5X1 160 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 PRO2289Q9P1D8 64 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 PRELID3BQ9Y3B1 194 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CNOT1A5YKK6 2376 aaKnown RBP1.31□□□□□ -2.2
CD44-234ENST00000531873 C3P01024 1663 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 CUL7Q14999 1698 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 COL4A2P08572 1712 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 MED12LQ86YW9 2145 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 BAZ2BQ9UIF8 2168 aaKnown RBP1.31□□□□□ -2.2
CD44-234ENST00000531873 EEA1Q15075 1411 aa1.31□□□□□ -2.2
CD44-234ENST00000531873 PTPRZ1P23471 2315 aaPredicted RBP1.31□□□□□ -2.2
CD44-234ENST00000531873 RANBP2P49792 3224 aaKnown RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 SPTBN5Q9NRC6 3674 aaKnown RBP1.3□□□□□ -2.2
CD44-234ENST00000531873 KIF14Q15058 1648 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 WIZO95785 1651 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 RGPD1P0DJD0 1748 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 SPHKAPQ2M3C7 1700 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 CENPFP49454 3210 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 TRBV20OR9-2A0A075B6H5 130 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 IGKV1D-43A0A0B4J1Z2 117 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 TRGV4A0A0C4DH28 118 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 A0A0G2JQZ4 141 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 FAM236DA0A1B0GTK5 79 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 PQLC2LA1A4F0 135 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 OR4C46A6NHA9 309 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 ZNF878C9JN71 531 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 J3QRE1 110 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 LEPROTO15243 131 aa1.3□□□□□ -2.2
CD44-234ENST00000531873 CNIH1O95406 144 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms