RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TEX37Q96LM6 180 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 CIB3Q96Q77 187 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 NMNAT3Q96T66 252 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SLC25A21Q9BQT8 299 aaPredicted RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SEC11CQ9BY50 192 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 GNB1LQ9BYB4 327 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 WDR61Q9GZS3 305 aaKnown RBP2.37□□□□□ -2.03
PTPRK-220ENST00000531466 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 DPM3Q9P2X0 92 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 INSIG2Q9Y5U4 225 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 MPC1Q9Y5U8 109 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 HEBP2Q9Y5Z4 205 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ENPP4Q9Y6X5 453 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ERVK-7P63135 1459 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 PCM1Q15154 2024 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 SYCP2Q9BX26 1530 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 DUOX2Q9NRD8 1548 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 PHLPP1O60346 1717 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 ANKRD26Q9UPS8 1709 aa2.37□□□□□ -2.03
PTPRK-220ENST00000531466 GLI3P10071 1580 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 NRKQ7Z2Y5 1582 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 PTPRKQ15262 1439 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 TNS2Q63HR2 1409 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 IGKV2-28A0A075B6P5 120 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 TRAV8-1A0A0A6YYK1 113 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 TRAV8-6A0A0B4J262 113 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 LOC100131303A0A0U1RQF7 123 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 LOC100130705A0A1B0GUX0 176 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 DHRS12A0PJE2 317 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 PLAC8L1A1L4L8 177 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 CD300LBA8K4G0 201 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 COLCA2A8K830 154 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 E9PLD3 99 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 J3QQQ9 107 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 NDUFS5O43920 106 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 TNFSF13O75888 250 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 APOMO95445 188 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 IGKV2D-28P01615 120 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 EIF4EP06730 217 aaKnown RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 CD55P08174 381 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 SPINK8P0C7L1 97 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 LINC00694P0DN24 101 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 CRYGSP22914 178 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 NFYBP25208 207 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 AQP4P55087 323 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ARPP19P56211 112 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 PPP1CAP62136 330 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 PLGLB1Q02325 96 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 SLC38A11Q08AI6 406 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ENDOGQ14249 297 aaKnown RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 IL17AQ16552 155 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 RTL8BQ17RB0 113 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 NSUN5P1Q3KNT7 163 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 KHDC3LQ587J8 217 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 AADACL3Q5VUY0 350 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM244Q5VVB8 128 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 FKBP1CQ5VVH2 108 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 LCN8Q6JVE9 175 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 CNIH2Q6PI25 160 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 AMTNQ6UX39 209 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF571Q7Z3V5 609 aaPredicted RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 NPWQ8N729 165 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 LY6G5BQ8NDX9 201 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 OR4B1Q8NGF8 309 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 OR4C16Q8NGL9 310 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 OR10AC1Q8NH08 325 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 OR51H1Q8NH63 302 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 FNDC9Q8TBE3 224 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 RPS4Y2Q8TD47 263 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 POP5Q969H6 163 aaKnown RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 BORCS8Q96FH0 119 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 MCEEQ96PE7 176 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 SELENOIQ9C0D9 397 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ATG5Q9H1Y0 275 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 EDA2RQ9HAV5 297 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ASF1BQ9NVP2 202 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 CALYQ9NYX4 217 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 UQCR10Q9UDW1 63 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 RIMS3Q9UJD0 308 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 MRPS16Q9Y3D3 137 aaKnown RBP2.36□□□□□ -2.03
PTPRK-220ENST00000531466 PXMP4Q9Y6I8 212 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 ADAMTSL3P82987 1691 aa2.36□□□□□ -2.03
PTPRK-220ENST00000531466 FRMPD3Q5JV73 1810 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ZC3H13Q5T200 1668 aaKnown RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 A0A1B0GXF2 115 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 IRGMA1A4Y4 181 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 ARRDC5A6NEK1 342 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 TMEM262E9PQX1 116 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 F5H5P2 479 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 GABARAPH6UMI1 98 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 H7C1H1 209 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 XKRYO14609 159 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 RER1O15258 196 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 SS18L1O75177 396 aaPredicted RBP2.35□□□□□ -2.03
PTPRK-220ENST00000531466 KRASP01116 189 aa2.35□□□□□ -2.03
PTPRK-220ENST00000531466 NMBP08949 121 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms