RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 A0A0G2JRQ6 117 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 NAP1L6A6NFF2 107 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 BMPR1BO00238 502 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 CYB5BO43169 146 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 MECP2P51608 486 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 MFAP2P55001 183 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 SUPT4H1P63272 117 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 RPEL1Q2QD12 228 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 CNPY1Q3B7I2 92 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 TMEM268Q5VZI3 342 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 SLC25A24Q6NUK1 477 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 Q6ZRM9 215 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 LINC00299Q6ZSB3 139 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 FAM219AQ8IW50 185 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 OR2C3Q8N628 320 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 IL22RA2Q969J5 263 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 EEF1AKMT3Q96AZ1 226 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 CXorf58Q96LI9 332 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 THYN1Q9P016 225 aa9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 F11RQ9Y624 299 aaKnown RBP9.71□□□□□ -0.86
CCDC90B-216ENST00000529856 TRBV7-1A0A0A6YYK4 115 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 ST8SIA3O43173 380 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 IGHV3-23P01764 117 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 IL7P13232 177 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 SYNJ2BPP57105 145 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 TATDN3Q17R31 274 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 OR1L6Q8NGR2 347 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 GPR146Q96CH1 333 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 CCDC140Q96MF4 163 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 ELOVL1Q9BW60 279 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 S4R3C0 116 aa9.7□□□□□ -0.86
CCDC90B-216ENST00000529856 LINC00854A0A1B0GVQ3 168 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 WI2-2373I1.2A0A1W2PRP0 233 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 MFSD2BA6NFX1 497 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 PPP5D1E7EU14 171 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 INS-IGF2F8WCM5 200 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 SAP30O75446 220 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 IFNA17P01571 189 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 CLEC3BP05452 202 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 ANXA3P12429 323 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 CCR6P51684 374 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 ERHP84090 104 aaKnown RBP9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 IL34Q6ZMJ4 242 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 TMED4Q7Z7H5 227 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 OR9G4Q8NGQ1 327 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 ZNF502Q8TBZ5 544 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 VN1R17PQ8TDU5 208 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 PLEKHA3Q9HB20 300 aa9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.69□□□□□ -0.86
CCDC90B-216ENST00000529856 CENPXA8MT69 81 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 GGCTO75223 188 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 NDUFB6O95139 128 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 ARL3P36405 182 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 SRPXP78539 464 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 RBMS2Q15434 407 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 SPINK9Q5DT21 86 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 LGI3Q8N145 548 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 SLC35G3Q8N808 338 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 ZNF114Q8NC26 417 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 OR52E5Q8NH55 327 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 MRAPQ8TCY5 172 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 OR4C12Q96R67 309 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 C7orf50Q9BRJ6 194 aaKnown RBP9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 PDCD10Q9BUL8 212 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 BATF3Q9NR55 127 aa9.68□□□□□ -0.86
CCDC90B-216ENST00000529856 A0A0B4J2A0 478 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 K7EIL1 84 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 PLA2G10O15496 165 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 OR2C1O95371 312 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 HLA-AP01891 365 aaKnown RBP9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 BTCP35070 178 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 SPCS3P61009 180 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 LYZL2Q7Z4W2 148 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 GPHB5Q86YW7 130 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 CENPSQ8N2Z9 138 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 SCARB1Q8WTV0 552 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 SHPKQ9UHJ6 478 aa9.67□□□□□ -0.86
CCDC90B-216ENST00000529856 PRKDCP78527 4128 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 IGHV3-21A0A0B4J1V1 117 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 K7EIM0 57 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 SFT2D2O95562 160 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 CSN3P07498 182 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 SULT1A3P0DMM9 295 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 SULT1A4P0DMN0 295 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 SNCAP37840 140 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 NMSQ5H8A3 153 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 LRTM2Q8N967 370 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 S100ZQ8WXG8 99 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 ATP6V0BQ99437 205 aa9.66□□□□□ -0.86
CCDC90B-216ENST00000529856 CCDC32Q9BV29 185 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms