RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NQO2P16083 231 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 BRWD1-AS2P59051 145 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 RPS25P62851 125 aaKnown RBP6.54□□□□□ -1.36
VPS11-203ENST00000529545 CATR1Q13166 79 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 EIF4EBP1Q13541 118 aaPredicted RBP6.54□□□□□ -1.36
VPS11-203ENST00000529545 CDNFQ49AH0 187 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 TMEM41BQ5BJD5 291 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 SOHLH1Q5JUK2 328 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 Q6ZTC4 211 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 STHQ8IWL8 128 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 Q8NAQ8 132 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 OR10W1Q8NGF6 305 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 SCARB1Q8WTV0 552 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 SECTM1Q8WVN6 248 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 HINT2Q9BX68 163 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 ATG5Q9H1Y0 275 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 LSM2Q9Y333 95 aaKnown RBP6.54□□□□□ -1.36
VPS11-203ENST00000529545 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
VPS11-203ENST00000529545 IGHV3-49A0A0A0MS15 119 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 TRAV14DV4A0A0A6YYC5 116 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 IGHV3-21A0A0B4J1V1 117 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 TRAV3A0A0B4J244 114 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 IGHV4-28A0A0C4DH34 117 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 IFITM5A6NNB3 132 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 SULT1C2O00338 296 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 RTL8CO15255 209 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 TNFSF12O43508 249 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 FGF2P09038 288 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 GNG2P59768 71 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 DEFB131AP59861 70 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 ARPC4P59998 168 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 ERVK-16P61578 105 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
VPS11-203ENST00000529545 MSMO1Q15800 293 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 POU2AF1Q16633 256 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 HACD4Q5VWC8 232 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 TCF24Q7RTU0 167 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 ZBTB34Q8NCN2 500 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 OR1L8Q8NGR8 309 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 ACOT13Q9NPJ3 140 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 TMEM140Q9NV12 185 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 F11RQ9Y624 299 aaKnown RBP6.53□□□□□ -1.36
VPS11-203ENST00000529545 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
VPS11-203ENST00000529545 IGHV3OR16-13A0A075B7E8 117 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 IGHV3-74A0A0B4J1X5 117 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 TEX50A0A1B0GTY4 177 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 H3BS24 57 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 CASQ2O14958 399 aaPredicted RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 ST8SIA3O43173 380 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 IFNA10P01566 189 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 IFNA21P01568 189 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 IFNA17P01571 189 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 AMBPP02760 352 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 CTSGP08311 255 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 RBMY1A1P0DJD3 496 aaKnown RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 RBMY1CP0DJD4 496 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 MYL9P24844 172 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 NPY1RP25929 384 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 FABP5Q01469 135 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 WT1-ASQ06250 92 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 MLLT11Q13015 90 aaPredicted RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 RCN1Q15293 331 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 RBMY1FQ15415 496 aaKnown RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 LGALS9BQ3B8N2 356 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 LEMD1Q68G75 181 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 MORN3Q6PF18 240 aaPredicted RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 UBE2DNLQ8IWF7 75 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 DUSP18Q8NEJ0 188 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 OR13F1Q8NGS4 319 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 LSM10Q969L4 123 aaKnown RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 DGCR14Q96DF8 476 aaKnown RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 PLEKHA2Q9HB19 425 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 CCL28Q9NRJ3 127 aa6.52□□□□□ -1.37
VPS11-203ENST00000529545 ELF5Q9UKW6 265 aaPredicted RBP6.52□□□□□ -1.37
VPS11-203ENST00000529545 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 TRAV1-2A0A0B4J238 106 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 K7EIM0 57 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 SNAPC5O75971 98 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 SCGNO76038 276 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 SPP1P10451 314 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 FCGR2CP31995 323 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 MFAP4P55083 255 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 OR10A3P58181 314 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 FAM90A2PQ658T7 463 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 ZNF773Q6PK81 442 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 NUDCD2Q8WVJ2 157 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 GIMAP1Q8WWP7 306 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 BORCS5Q969J3 196 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 OR10C1Q96KK4 312 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 TXN2Q99757 166 aa6.51□□□□□ -1.37
VPS11-203ENST00000529545 KRTAP4-5Q9BYR2 181 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms