RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 C2orf70A6NJV1 201 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 IFNA17P01571 189 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 CTSDP07339 412 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-216ENST00000528739 FRMD6-AS1P0C7T7 363 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 S100A5P33763 92 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 CD300EQ496F6 205 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-216ENST00000528739 PYDC2Q56P42 97 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 GPHB5Q86YW7 130 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 CADM3Q8N126 398 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 OR4C16Q8NGL9 310 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 SLIRPQ9GZT3 109 aaKnown RBP10.86□□□□□ -0.67
CAPN1-216ENST00000528739 PLEKHA3Q9HB20 300 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 TMEM14BQ9NUH8 114 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 SIGLEC8Q9NYZ4 499 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 U3KQK5 164 aa10.86□□□□□ -0.67
CAPN1-216ENST00000528739 IZUMO1RA6ND01 250 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 IGHV4-30-4P0DP06 118 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 EDN2P20800 178 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
CAPN1-216ENST00000528739 SBSPONQ8IVN8 264 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 SLC35G3Q8N808 338 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 OR51S1Q8NGJ8 323 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 OR2K2Q8NGT1 345 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 VN1R17PQ8TDU5 208 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 CACNG8Q8WXS5 425 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
CAPN1-216ENST00000528739 PRRT1Q99946 306 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 PALMDQ9NP74 551 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 ENY2Q9NPA8 101 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 C21orf62Q9NYP8 219 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 SCP2D1Q9UJQ7 156 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
CAPN1-216ENST00000528739 LGALS9O00182 355 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 TGOLN2O43493 480 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 CBLN1P23435 193 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 SNCAP37840 140 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 UXS1Q8NBZ7 420 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 THAP7Q9BT49 309 aaPredicted RBP10.84□□□□□ -0.67
CAPN1-216ENST00000528739 C20orf24Q9BUV8 137 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 SLC2A8Q9NY64 477 aa10.84□□□□□ -0.67
CAPN1-216ENST00000528739 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 GSTZ1O43708 216 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 IGKV1-5P01602 117 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 HOXA1P49639 335 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 MFAP2P55001 183 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 CD81P60033 236 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 KLK9Q2XQG4 91 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 TM4SF20Q53R12 229 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 ZNF57Q68EA5 555 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 Q8N1Y9 231 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 OR2C3Q8N628 320 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 OR1P1Q8NH06 330 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 SCARB1Q8WTV0 552 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 BSCL2Q96G97 398 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 WWC2-AS2Q96NR7 200 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 SCGB3A2Q96PL1 93 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 RTBDNQ9BSG5 229 aaPredicted RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 TECRQ9NZ01 308 aaKnown RBP10.83□□□□□ -0.68
CAPN1-216ENST00000528739 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 KCNIP3Q9Y2W7 256 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 UFC1Q9Y3C8 167 aa10.83□□□□□ -0.68
CAPN1-216ENST00000528739 ST8SIA3O43173 380 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 B3GALNT1O75752 331 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 YIF1AO95070 293 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 UCP1P25874 307 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 FAUP35544 74 aaKnown RBP10.82□□□□□ -0.68
CAPN1-216ENST00000528739 ETV6P41212 452 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 DHODHQ02127 395 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-216ENST00000528739 UNQ9165/PRO28630Q6UXU0 137 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 ADAMTSL5Q6ZMM2 481 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 WDR89Q96FK6 387 aaPredicted RBP10.82□□□□□ -0.68
CAPN1-216ENST00000528739 C5orf66Q9H5L9 145 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 GPR132Q9UNW8 380 aa10.82□□□□□ -0.68
CAPN1-216ENST00000528739 IGHV3OR16-8A0A075B7F1 116 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 A0A0B4J293 547 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 TMEM213A2RRL7 107 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
CAPN1-216ENST00000528739 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
CAPN1-216ENST00000528739 MT-CO2P00403 227 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 IGHV3-48P01763 117 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 AKR1C4P17516 323 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 SUB1P53999 127 aaKnown RBP eCLIP10.81□□□□□ -0.68
CAPN1-216ENST00000528739 MFAP4P55083 255 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 AP3S2P59780 193 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 TMEM268Q5VZI3 342 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 BTNL8Q6UX41 500 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
CAPN1-216ENST00000528739 TOMM5Q8N4H5 51 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 NEURL2Q9BR09 285 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 NXF2Q9GZY0 626 aaKnown RBP10.81□□□□□ -0.68
CAPN1-216ENST00000528739 TMEM222Q9H0R3 208 aa10.81□□□□□ -0.68
CAPN1-216ENST00000528739 GAR1Q9NY12 217 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms