RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CT45A5P0DMU8 189 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 CT45A7P0DMV0 189 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 LHX2P50458 406 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 ZNF137PP52743 207 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 RHOBP62745 196 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 CT45A1Q5HYN5 189 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 CENPVQ7Z7K6 275 aaPredicted RBP14.95□□□□□ -0.02
LTBP3-210ENST00000528516 NUDT10Q8NFP7 164 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 OR1L4Q8NGR5 311 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 OR1B1Q8NGR6 318 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 CT45A3Q8NHU0 189 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 OR5P3Q8WZ94 311 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 SLC25A5P05141 298 aaKnown RBP14.95□□□□□ -0.02
LTBP3-210ENST00000528516 Q0VFX4 171 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 OR4S2Q8NH73 311 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 BCL2L2Q92843 193 aaPredicted RBP14.95□□□□□ -0.02
LTBP3-210ENST00000528516 OTOGLQ3ZCN5 2332 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 C3orf79P0CE67 100 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 ARL14EPLP0DKL9 152 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 IL36BQ9NZH7 164 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 TIMM9Q9Y5J7 89 aa14.95□□□□□ -0.02
LTBP3-210ENST00000528516 TNRC18O15417 2968 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 IGHV3-35A0A0C4DH35 117 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 CHEK1O14757 476 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 FRMD6-AS1P0C7T7 363 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TIMP3P35625 211 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 RPL31P62899 125 aaKnown RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TNXAQ16473 311 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 ACSF3Q4G176 576 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 SLC24A4Q8NFF2 622 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 OR2D3Q8NGH3 330 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TP53TG3Q9ULZ0 132 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 IGLV3-1P01715 115 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TMEM144Q7Z5S9 345 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 OR13A1Q8NGR1 328 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 LSM10Q969L4 123 aaKnown RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 FLYWCH2Q96CP2 140 aaKnown RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 RNF114Q9Y508 228 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TMSB15BA0A087X1C1 80 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 RRHO14718 337 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 SUB1P53999 127 aaKnown RBP eCLIP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 GMPPAQ96IJ6 420 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-210ENST00000528516 ONECUT1Q9UBC0 465 aa14.94□□□□□ -0.02
LTBP3-210ENST00000528516 TRAV24A0A0B4J272 114 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 WNT2P09544 360 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 PSG1P11464 419 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 RIPPLY3P57055 190 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 YPEL3P61236 119 aaPredicted RBP14.93□□□□□ -0.02
LTBP3-210ENST00000528516 LHFPL4Q7Z7J7 247 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 SH2D2AQ9NP31 389 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 YPEL1O60688 119 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 NEURL1O76050 574 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 IGKV1-39P01597 117 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 IGKV1D-39P04432 117 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 GGNQ86UU5 652 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 YPEL2Q96QA6 119 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 SAP30LQ9HAJ7 183 aa14.93□□□□□ -0.02
LTBP3-210ENST00000528516 K7ERU9 68 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 M0R2Z0 102 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 NUDT11Q96G61 164 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 IGKV3-7A0A075B6H7 116 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 OTX1P32242 354 aaPredicted RBP14.92□□□□□ -0.02
LTBP3-210ENST00000528516 RBPJQ06330 500 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 SLC25A53Q5H9E4 307 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 C20orf204Q6ZNR8 217 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 KCNS1Q96KK3 526 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 SSBP3Q9BWW4 388 aaPredicted RBP14.92□□□□□ -0.02
LTBP3-210ENST00000528516 HSPB7Q9UBY9 170 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 IGHV2OR16-5A0A0B4J2B6 119 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 MLNRO43193 412 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 TNFRSF1AP19438 455 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 CRYGSP22914 178 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 LYZP61626 148 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 FAM27E3Q08E93 113 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 PRO3102Q9H379 93 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 SPTBN4Q9H254 2564 aa14.92□□□□□ -0.02
LTBP3-210ENST00000528516 RAB29O14966 203 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 GFRA1P56159 465 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 INO80CQ6PI98 192 aaPredicted RBP14.91□□□□□ -0.02
LTBP3-210ENST00000528516 TMEM108Q6UXF1 575 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 ZNF324O75467 553 aaPredicted RBP14.91□□□□□ -0.02
LTBP3-210ENST00000528516 HELTA6NFD8 242 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 CECR9P0C854 216 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 LRRC10Q5BKY1 277 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 C1QTNF5Q9BXJ0 243 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 CST9LQ9H4G1 147 aa14.91□□□□□ -0.02
LTBP3-210ENST00000528516 LOC105371242A0A075B767 164 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 HIST3H3Q16695 136 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 RCHY1Q96PM5 261 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 FTH1P19P0C7X4 201 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 WDR73Q6P4I2 378 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 TEPPQ6URK8 271 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 DOLPP1Q86YN1 238 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 S4R3C0 116 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 PIEZO1Q92508 2521 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 OCIAD2Q56VL3 154 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 PEAR1Q5VY43 1037 aaPredicted RBP14.9□□□□□ -0.02
LTBP3-210ENST00000528516 TMEM140Q9NV12 185 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 CRIM1Q9NZV1 1036 aa14.9□□□□□ -0.02
LTBP3-210ENST00000528516 hADV38S2A0JD32 116 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 647.4 ms