RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 LYL1P12980 280 aa6.32□□□□□ -1.4
SOX6-211ENST00000528429 MEF2CQ06413 473 aaPredicted RBP6.32□□□□□ -1.4
SOX6-211ENST00000528429 TNXAQ16473 311 aa6.32□□□□□ -1.4
SOX6-211ENST00000528429 ZNF66Q6ZN08 573 aa6.32□□□□□ -1.4
SOX6-211ENST00000528429 C19orf35Q6ZS72 473 aa6.32□□□□□ -1.4
SOX6-211ENST00000528429 TIMD4Q96H15 378 aa6.32□□□□□ -1.4
SOX6-211ENST00000528429 DUTP33316 252 aaKnown RBP6.31□□□□□ -1.4
SOX6-211ENST00000528429 DLX1P56177 255 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 BRWD1-AS2P59051 145 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 EIF4EBP1Q13541 118 aaPredicted RBP6.31□□□□□ -1.4
SOX6-211ENST00000528429 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
SOX6-211ENST00000528429 KAAG1Q9UBP8 84 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 LPAR3Q9UBY5 353 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 FBXL17Q9UF56 701 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 MAP1AP78559 2803 aaPredicted RBP6.31□□□□□ -1.4
SOX6-211ENST00000528429 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 A0A1B0GU03 582 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 FAM24AA6NFZ4 105 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 RAB29O14966 203 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 CHST1O43916 411 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 OR2C1O95371 312 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 IAPPP10997 89 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 SCGB1A1P11684 91 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 SEC61GP60059 68 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 HEPN1Q6WQI6 88 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 C1orf229Q6ZS94 237 aaPredicted RBP6.31□□□□□ -1.4
SOX6-211ENST00000528429 DTX2Q86UW9 622 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 VKORC1L1Q8N0U8 176 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 ZNF843Q8N446 348 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 PLEKHA2Q9HB19 425 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 DSCAML1Q8TD84 2053 aa6.31□□□□□ -1.4
SOX6-211ENST00000528429 TANC2Q9HCD6 1990 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 PDE6DO43924 150 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 MT-CO2P00403 227 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 AMBPP02760 352 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 MT-ND4LP03901 98 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 WNT2P09544 360 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 OR10J4P0C629 311 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 TPT1P13693 172 aaKnown RBP6.3□□□□□ -1.4
SOX6-211ENST00000528429 IGFBP2P18065 325 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 REG1BP48304 166 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ELLP55199 621 aaPredicted RBP6.3□□□□□ -1.4
SOX6-211ENST00000528429 PDZD11Q5EBL8 140 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 RPL7L1Q6DKI1 246 aaKnown RBP6.3□□□□□ -1.4
SOX6-211ENST00000528429 H2BFWTQ7Z2G1 175 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 TMEM217Q8N7C4 229 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 OR4P4Q8NGL7 312 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 TMED6Q8WW62 240 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 NEU4Q8WWR8 484 aaPredicted RBP6.3□□□□□ -1.4
SOX6-211ENST00000528429 LSM10Q969L4 123 aaKnown RBP6.3□□□□□ -1.4
SOX6-211ENST00000528429 S1PR3Q99500 378 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 CHRDL1Q9BU40 450 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 CST7O76096 145 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 TMEM50AO95807 157 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 GATA3P23771 443 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ERVFC1-1P60608 527 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ID3Q02535 119 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ZNF439Q8NDP4 499 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 OR8B3Q8NGG8 313 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ORAOV1Q8WV07 137 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 ST6GALNAC6Q969X2 333 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 OR8B2Q96RD0 313 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 UQCC1Q9NVA1 299 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 CENPEQ02224 2701 aa6.3□□□□□ -1.4
SOX6-211ENST00000528429 DOCK11Q5JSL3 2073 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 FGF16O43320 207 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 GPR137BO60478 399 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 P2RY1P47900 373 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 NDUFA6P56556 154 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 SRSF3P84103 164 aaKnown RBP6.29□□□□□ -1.4
SOX6-211ENST00000528429 EWSR1Q01844 656 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX6-211ENST00000528429 SRSF1Q07955 248 aaKnown RBP eCLIP6.29□□□□□ -1.4
SOX6-211ENST00000528429 MSMO1Q15800 293 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 TMEM155Q4W5P6 130 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 KHDC3LQ587J8 217 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 SPINK9Q5DT21 86 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 COL5A1-AS1Q5SY13 56 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 PRR27Q6MZM9 219 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 SLC25A48Q6ZT89 311 aaKnown RBP6.29□□□□□ -1.4
SOX6-211ENST00000528429 NEIL1Q96FI4 390 aaPredicted RBP6.29□□□□□ -1.4
SOX6-211ENST00000528429 CLCC1Q96S66 551 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 LINC00574Q9H8X3 128 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 CYTL1Q9NRR1 136 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 IGSF23A1L1A6 192 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 A1L4Q6 167 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 CORTO00230 105 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 SYNGR2O43760 224 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 PITX3O75364 302 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 ERVK-16P61578 105 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 GNB2P62879 340 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 TMEM267Q0VDI3 215 aaPredicted RBP6.29□□□□□ -1.4
SOX6-211ENST00000528429 ZNF841Q6ZN19 808 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 ZNF705AQ6ZN79 300 aaPredicted RBP6.29□□□□□ -1.4
SOX6-211ENST00000528429 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 RAB39BQ96DA2 213 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 TMEM231Q9H6L2 316 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 MMP26Q9NRE1 261 aa6.29□□□□□ -1.4
SOX6-211ENST00000528429 C1QL1O75973 258 aa6.28□□□□□ -1.4
SOX6-211ENST00000528429 SLC25A6P12236 298 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms