RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SPAG17Q6Q759 2223 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 CACNA1EQ15878 2313 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 YLPM1P49750 1951 aaKnown RBP3.86□□□□□ -1.79
PCF11-202ENST00000528336 EML5Q05BV3 1969 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 TRAV26-2A0A0B4J265 109 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 SPTY2D1-AS1A0A0U1RR47 76 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 CD300LBA8K4G0 201 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 E7EQ34 232 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 PANO1I0J062 215 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 DNASE2O00115 360 aaPredicted RBP3.86□□□□□ -1.79
PCF11-202ENST00000528336 DLEU1O43261 78 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 ZNF861PO60384 105 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 KCNK2O95069 426 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 SOD1P00441 154 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 BGLAPP02818 100 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 SERPINE1P05121 402 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 COX4I1P13073 169 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 CTLA4P16410 223 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 TALDO1P37837 337 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 HERVK_113P61574 105 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 GNG5P63218 68 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 MEF2CQ06413 473 aaPredicted RBP3.86□□□□□ -1.79
PCF11-202ENST00000528336 IL15RAQ13261 267 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 Q6ZSR6 202 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 MMGT1Q8N4V1 131 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 ZNF615Q8N8J6 731 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 STARD4Q96DR4 205 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 C1orf50Q9BV19 199 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 CCDC90BQ9GZT6 254 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 PARP11Q9NR21 331 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 MMP26Q9NRE1 261 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 KNL1Q8NG31 2342 aa3.86□□□□□ -1.79
PCF11-202ENST00000528336 DMDP11532 3685 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 G3V2T6 193 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 ZNF207O43670 478 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 ANGPTL7O43827 346 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 IFNGP01579 166 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 C1QCP02747 245 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 LGALS1P09382 135 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 SNRPD2P62316 118 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 CRADDP78560 199 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 CAV1Q03135 178 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 RBMY1FQ15415 496 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 RSPO1Q2MKA7 263 aaPredicted RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 SBSNQ6UWP8 590 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 SHISA6Q6ZSJ9 500 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 FAM19A3Q7Z5A8 133 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 PRNTQ86SH4 94 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 FAM24BQ8N5W8 94 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 DRAM1Q8N682 238 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 OR10G4Q8NGN3 311 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 OR13C4Q8NGS5 318 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 CT55Q8WUE5 264 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 GHSRQ92847 366 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 TCEAL3Q969E4 200 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 COX14Q96I36 57 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 LINC01587Q99440 93 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 CCDC32Q9BV29 185 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 MRPL20Q9BYC9 149 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 EIF5A2Q9GZV4 153 aaKnown RBP3.85□□□□□ -1.79
PCF11-202ENST00000528336 TMEM222Q9H0R3 208 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 OR52D1Q9H346 318 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 PRTFDC1Q9NRG1 225 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 ENPP4Q9Y6X5 453 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 CEP250Q9BV73 2442 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 THADAQ6YHU6 1953 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 TRPM6Q9BX84 2022 aa3.85□□□□□ -1.79
PCF11-202ENST00000528336 USP34Q70CQ2 3546 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 LAMA1P25391 3075 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 ANKRD36A6QL64 1941 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 IGLV3-16A0A075B6K0 115 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 F5H5P2 479 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 H7C1C5 153 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 CCL22O00626 93 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 DEGS1O15121 323 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 SS18L1O75177 396 aaPredicted RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 SLC25A14O95258 325 aaPredicted RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 FABP3P05413 133 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 FBP1P09467 338 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 CTSEP14091 401 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 S100A7P31151 101 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 SERPINB10P48595 397 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 MP68P56378 58 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 LCN6P62502 163 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 RPL23P62829 140 aaKnown RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 GRB2P62993 217 aaKnown RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 DAZ2Q13117 558 aaKnown RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 ARFRP1Q13795 201 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 DAZ4Q86SG3 579 aaKnown RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 IFT20Q8IY31 132 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 GDPD1Q8N9F7 314 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 OR9Q1Q8NGQ5 310 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 C7orf33Q8WU49 177 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 DCUN1D4Q92564 292 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 EXOSC8Q96B26 276 aaKnown RBP3.84□□□□□ -1.79
PCF11-202ENST00000528336 ROPN1LQ96C74 230 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 PLEKHB2Q96CS7 222 aa3.84□□□□□ -1.79
PCF11-202ENST00000528336 PDXPQ96GD0 296 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 241.9 ms