RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 RBPJQ06330 500 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 NUP35Q8NFH5 326 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 SGK494Q96LW2 274 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 MMP17Q9ULZ9 603 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 CHD9Q3L8U1 2897 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 TMEM30CPA0ZSE6 113 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 J3QT63 122 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 P04436 131 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 OR2K2Q8NGT1 345 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 CT55Q8WUE5 264 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 RNF138Q8WVD3 245 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 PRRG4Q9BZD6 226 aa10.34□□□□□ -0.75
TSKU-203ENST00000527881 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 ZNF138P52744 262 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 TMEM97Q5BJF2 176 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 WIPI1Q5MNZ9 446 aaPredicted RBP10.33□□□□□ -0.76
TSKU-203ENST00000527881 HES3Q5TGS1 186 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 Q6P435 159 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 CXorf67Q86X51 503 aaPredicted RBP10.33□□□□□ -0.76
TSKU-203ENST00000527881 C5orf30Q96GV9 206 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 A6NDN8 102 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 FAM162BQ5T6X4 162 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 OR10AG1Q8NH19 301 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 AKIRIN1Q9H9L7 192 aaPredicted RBP10.33□□□□□ -0.76
TSKU-203ENST00000527881 OR51B2Q9Y5P1 312 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 LRP4O75096 1905 aa10.33□□□□□ -0.76
TSKU-203ENST00000527881 A0A1W2PRE2 83 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 GPR12P47775 334 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 SSR4P51571 173 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 GDF5OSQ5U4N7 250 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 NABP2Q9BQ15 211 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 DOCK10Q96BY6 2186 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 ZNF716A6NP11 495 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 GGTLC3B5MD39 225 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 J3QW42 95 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 TFF1P04155 84 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 P0C879 139 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 LYSMD4Q5XG99 296 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 BHLHA15Q7RTS1 189 aaPredicted RBP10.32□□□□□ -0.76
TSKU-203ENST00000527881 GNG12Q9UBI6 72 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 LTBP2Q14767 1821 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 IGHV1-24A0A0C4DH33 117 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 TAS2R45P59539 299 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 UBE2L3P68036 154 aaKnown RBP10.32□□□□□ -0.76
TSKU-203ENST00000527881 EDDM3AQ14507 147 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 TMEM240Q5SV17 173 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 TMEM116Q8NCL8 245 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 SNRNP40Q96DI7 357 aaKnown RBP10.32□□□□□ -0.76
TSKU-203ENST00000527881 MPC1Q9Y5U8 109 aa10.32□□□□□ -0.76
TSKU-203ENST00000527881 A0A1B0GV72 72 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
TSKU-203ENST00000527881 KRTAP27-1Q3LI81 207 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 TCF24Q7RTU0 167 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 RTL8AQ9BWD3 113 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 PTPRSQ13332 1948 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 AHRRA9YTQ3 701 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 J3QR06 171 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 THYN1Q9P016 225 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 JKAMPQ9P055 326 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 EXPH5Q8NEV8 1989 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 TRAV3A0A0B4J244 114 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 A0A0G2JLM5 398 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 CHEK1O14757 476 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 AZU1P20160 251 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 COLCA1Q6ZS62 124 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 PERPQ96FX8 193 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 SCRT2Q9NQ03 307 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 TCF19Q9Y242 345 aa10.31□□□□□ -0.76
TSKU-203ENST00000527881 TNFSF15O95150 251 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 SEC11AP67812 179 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 OR4A5Q8NH83 315 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 BRWD1Q9NSI6 2320 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 GFRA3O60609 400 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 SMPD2O60906 423 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 LGALS7P47929 136 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
TSKU-203ENST00000527881 PSPNO60542 156 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 POM121L2Q96KW2 1035 aa10.3□□□□□ -0.76
TSKU-203ENST00000527881 AMMECR1Q9Y4X0 333 aaPredicted RBP10.3□□□□□ -0.76
TSKU-203ENST00000527881 LIPFP07098 398 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 GDF1P27539 372 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 RPS19BP1Q86WX3 136 aaKnown RBP10.29□□□□□ -0.76
TSKU-203ENST00000527881 GRAMD2BQ96HH9 432 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 PGLYRP4Q96LB8 373 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 OOEPA6NGQ2 149 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 M0R296 226 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 KLF5Q13887 457 aaPredicted RBP10.29□□□□□ -0.76
TSKU-203ENST00000527881 JMJD8Q96S16 334 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 CDX2Q99626 313 aaPredicted RBP10.29□□□□□ -0.76
TSKU-203ENST00000527881 PKIBQ9C010 78 aa10.29□□□□□ -0.76
TSKU-203ENST00000527881 MBNL3Q9NUK0 354 aaKnown RBP10.29□□□□□ -0.76
TSKU-203ENST00000527881 HSPB8Q9UJY1 196 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms